Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y10 4.6225407
2R:R:V20 7.42333616
3R:R:P23 8.995415
4R:R:F24 5.145615
5R:R:Q28 7.8075415
6R:R:Y29 6.2775404
7R:R:Y30 6.89333614
8R:R:L31 5.77414
9R:R:M44 6.378507
10R:R:F52 9.86406
11R:R:H65 5.696575
12R:R:L68 4.752577
13R:R:L72 5.3625408
14R:R:N73 6.265408
15R:R:I75 5.275407
16R:R:F91 5.664117
17R:R:Y96 11.0375494
18R:R:F103 7.372518
19R:R:F115 8.575406
20R:R:E122 7.48436
21R:R:W126 8.60833635
22R:R:R135 12.2725409
23R:R:V138 4.2025408
24R:R:W161 5.64409
25R:R:P170 4.36437
26R:R:W175 7.92535
27R:R:R177 14.23415
28R:R:Y178 7.86333603
29R:R:P180 5.286513
30R:R:E181 7.162554
31R:R:M183 7.055402
32R:R:Q184 6.8825413
33R:R:I189 7.3434
34R:R:D190 11.078514
35R:R:Y191 7.44406
36R:R:Y192 6.85555
37R:R:T193 7.485615
38R:R:H195 11.64614
39R:R:F203 10.28636
40R:R:H211 9.26167636
41R:R:F261 7.3525409
42R:R:W265 8.398508
43R:R:Y268 5.88456
44R:R:F283 7.32454
45R:R:P285 3.6025403
46R:R:F287 8.0825454
47R:R:M288 6.2475454
48R:R:Y306 14.66409
49R:R:F313 9.334508
50S:S:Y10 4.6225407
51S:S:N15 11.2425427
52S:S:V20 7.645626
53S:S:P23 8.995425
54S:S:F24 5.066525
55S:S:Q28 7.8075425
56S:S:Y29 7.0625404
57S:S:Y30 7.446524
58S:S:L31 5.77424
59S:S:M44 6.378507
60S:S:F52 8.6175406
61S:S:H65 5.696585
62S:S:L68 4.434587
63S:S:L72 5.3625408
64S:S:N73 6.265408
65S:S:Y74 6.675405
66S:S:I75 5.275407
67S:S:F91 5.664137
68S:S:Y96 10.2225494
69S:S:F103 7.092528
70S:S:F115 8.27406
71S:S:E122 7.48446
72S:S:W126 8.99667645
73S:S:R135 12.2725409
74S:S:P170 4.0225447
75S:S:W175 7.65545
76S:S:R177 10.095425
77S:S:Y178 7.86333603
78S:S:P180 5.286523
79S:S:E181 7.875464
80S:S:M183 7.055402
81S:S:Q184 6.8825423
82S:S:I189 7.3444
83S:S:D190 12.33424
84S:S:Y191 7.44406
85S:S:Y192 6.85565
86S:S:T193 7.485625
87S:S:H195 9.82524
88S:S:F203 9.83833646
89S:S:H211 9.08646
90S:S:F261 7.3525409
91S:S:W265 8.398508
92S:S:Y268 5.88466
93S:S:F276 9.084144
94S:S:F283 7.32464
95S:S:P285 3.6025403
96S:S:F287 8.0825464
97S:S:M288 6.2475464
98S:S:Y306 15.5375409
99S:S:F313 9.334508
100H:H:?1 16.9075410
101H:H:?3 27.815410
102H:H:?7 18.4325400
103H:H:?10 15.4017620
104H:H:?15 18.9825400
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:Y10 R:R:Y192 18.83388.94YesYes075
2R:R:T193 R:R:Y10 18.37813.75YesYes057
3R:R:I179 R:R:P180 15.93475.08NoYes113
4R:R:P180 R:R:P23 19.90133.9YesYes135
5R:R:P23 R:R:Q28 18.95689.47YesYes155
6R:R:Q28 R:R:Y30 27.076111.27YesYes154
7R:R:V20 R:R:Y30 18.0497.57YesYes164
8R:R:P180 R:R:Q184 24.36967.9YesYes133
9R:R:Q184 R:R:Q28 18.95373.84YesYes135
10R:R:F24 R:R:P180 15.19975.78YesYes153
11H:H:?1 R:R:V20 12.63243.99YesYes106
12R:R:F103 R:R:F24 18.33015.36YesYes185
13R:R:C187 R:R:P180 15.08913.77NoYes193
14R:R:C187 R:R:F103 15.35386.98NoYes198
15R:R:E181 R:R:Y192 21.08436.73YesYes545
16R:R:E181 R:R:S186 42.13524.31YesNo045
17R:R:F293 R:R:S186 42.2776.61NoNo055
18R:R:F293 R:R:L40 91.858415.83NoNo055
19R:R:L40 R:R:M183 92.51065.65NoYes052
20R:R:F37 R:R:M183 92.90138.71NoYes052
21R:R:F37 R:R:Y29 93.03148.25NoYes054
22R:R:P27 R:R:Y29 93.9418.34NoYes084
23R:R:P27 R:R:Y102 94.07075.56NoNo084
24R:R:F293 R:R:Y43 50.45425.16NoNo054
25R:R:L47 R:R:Y43 50.169814.07NoNo074
26R:R:L47 R:R:M44 50.02795.65NoYes077
27R:R:F91 R:R:M44 16.22638.71YesYes077
28R:R:M44 R:R:T94 17.55977.53YesNo077
29R:R:K296 R:R:M44 17.55975.76NoYes077
30R:R:V104 R:R:Y102 94.200410.09NoNo044
31R:R:H100 R:R:V104 94.33016.92NoNo044
32R:R:H100 R:R:Y96 47.229816.33NoYes944
33R:R:Y96 S:S:H100 47.56977.62YesNo944
34S:S:H100 S:S:V104 95.18086.92NoNo044
35S:S:V104 S:S:Y102 95.221110.09NoNo044
36S:S:P27 S:S:Y102 95.26135.56NoNo084
37S:S:P27 S:S:Y29 95.34168.34NoYes084
38S:S:F37 S:S:Y29 95.46177.22NoYes054
39S:S:F37 S:S:M183 95.50178.71NoYes052
40S:S:L40 S:S:M183 95.77985.65NoYes052
41S:S:F293 S:S:L40 95.977115.83NoNo055
42S:S:F293 S:S:Y43 96.05565.16NoNo054
43S:S:L47 S:S:Y43 96.13414.07NoNo074
44S:S:L47 S:S:M44 96.17315.65NoYes077
45S:S:F91 S:S:M44 10.54128.71YesYes077
46R:R:H100 S:S:Y96 47.22974.36NoYes944
47S:S:H100 S:S:Y96 47.570216.33NoYes944
48R:R:F91 R:R:M86 13.87474.98YesNo077
49R:R:A299 R:R:M86 13.55993.22NoNo097
50R:R:A299 R:R:D83 13.40244.63NoNo099
51R:R:D83 R:R:N55 13.244913.46NoNo099
52R:R:N55 R:R:P303 12.92976.52NoNo099
53R:R:P303 R:R:T58 12.45665.25NoNo099
54R:R:F313 R:R:T58 12.1415.19YesNo089
55R:R:E181 R:R:Y268 20.207610.1YesYes546
56R:R:Y191 R:R:Y268 20.47345.96YesYes066
57R:R:I189 R:R:Y191 12.1359.67YesYes046
58R:R:F203 R:R:W175 12.985718.04YesYes365
59R:R:W175 R:R:Y206 12.0687.72YesNo354
60R:R:H211 R:R:Y206 11.115913.07YesNo364
61R:R:E113 R:R:F103 34.52344.66NoYes058
62R:R:E113 R:R:T94 17.411312.7NoNo057
63R:R:E113 R:R:K296 17.41139.45NoNo057
64S:S:Y10 S:S:Y192 90.66048.94YesYes075
65S:S:T193 S:S:Y10 91.50313.75YesYes057
66S:S:R177 S:S:T193 46.85016.47YesYes255
67S:S:I179 S:S:R177 47.56285.01NoYes215
68S:S:I179 S:S:P180 94.82115.08NoYes213
69S:S:F24 S:S:P180 49.34485.78YesYes253
70S:S:F103 S:S:F24 50.67175.36YesYes285
71S:S:E113 S:S:F103 1004.66NoYes058
72S:S:E113 S:S:T94 50.018312.7NoNo057
73S:S:M44 S:S:T94 50.01917.53YesNo077
74S:S:D190 S:S:T193 46.858213.01YesYes245
75S:S:D190 S:S:I179 47.13048.4YesNo241
76S:S:C187 S:S:P180 49.1483.77NoYes293
77S:S:C187 S:S:F103 49.18466.98NoYes298
78S:S:E113 S:S:K296 50.01829.45NoNo057
79S:S:K296 S:S:M44 50.01915.76NoYes077
80S:S:E181 S:S:Y192 42.18346.73YesYes645
81S:S:E181 S:S:Y268 41.612210.1YesYes646
82S:S:Y191 S:S:Y268 82.10695.96YesYes066
83S:S:I189 S:S:Y191 43.95079.67YesYes046
84S:S:F203 S:S:I189 33.563510.05YesYes464
85S:S:F203 S:S:W175 62.505918.04YesYes465
86S:S:W175 S:S:Y206 59.05977.72YesNo454
87S:S:H211 S:S:Y206 55.586711.98YesNo464
88S:S:E122 S:S:H211 32.4289.85YesYes466
89S:S:E122 S:S:L125 31.27733.98YesNo067
90S:S:F261 S:S:L125 30.12649.74YesNo097
91S:S:F261 S:S:W265 26.659112.03YesYes098
92S:S:C264 S:S:W265 22.02469.14NoYes088
93S:S:C264 S:S:Y301 20.86584.03NoNo085
94S:S:N302 S:S:Y301 18.548217.44NoNo095
95S:S:L79 S:S:N302 17.38935.49NoNo099
96S:S:L79 S:S:S127 16.23043NoNo098
97S:S:M288 S:S:Y192 43.33785.99YesYes645
98S:S:M288 S:S:Y268 41.64414.79YesYes646
99S:S:M207 S:S:Y191 37.01144.79NoYes056
100S:S:F203 S:S:M207 33.55274.98YesNo065
101S:S:H211 S:S:W126 19.68935.29YesYes465
102S:S:V129 S:S:W126 13.90836.13NoYes075
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8FD0_poly
Class A
SubFamily Sensory
Type Opsins
SubType Rhodopsin
Species Bos Taurus
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 3.71
Date 2023-08-30
D.O.I. 10.1038/s41467-023-40911-9
Net Summary
Imin 3.75
Number of Linked Nodes 599
Number of Links 696
Number of Hubs 104
Number of Links mediated by Hubs 377
Number of Communities 14
Number of Nodes involved in Communities 121
Number of Links involved in Communities 173
Path Summary
Number Of Nodes in MetaPath 103
Number Of Links MetaPath 102
Number of Shortest Paths 4458927
Length Of Smallest Path 3
Average Path Length 48.6038
Length of Longest Path 82
Minimum Path Strength 1.47
Average Path Strength 7.95288
Maximum Path Strength 35.84
Minimum Path Correlation 0.7
Average Path Correlation 0.990146
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 2.08333
Average % Of Corr. Nodes 49.0509
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 46.7074
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNAG
PDB ResiduesH:H:?1 H:H:?2 H:H:?5 H:H:?7 H:H:?8 H:H:?10 H:H:?11 H:H:?15 H:H:?16
Environment DetailsOpen EMBL-EBI Page
CodeNAG
NameN-Acetylglucosamine
SynonymsN-Acetyl-D-glucosamine
IdentifierN-[(2R,3R,4R,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]ethanamide
FormulaC8 H15 N O6
Molecular Weight221.208
SMILESCC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
PubChem24139
Formal Charge0
Total Atoms30
Total Chiral Atoms5
Total Bonds30
Total Aromatic Bonds0

CodeBMA
PDB ResiduesH:H:?3 H:H:?9 H:H:?12
Environment DetailsOpen EMBL-EBI Page
CodeBMA
Namebeta-D-mannopyranose
Synonymsbeta-D-mannose; D-mannose; mannose
Identifier(2R,3S,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol
FormulaC6 H12 O6
Molecular Weight180.156
SMILESC([C@@H]1[C@H]([C@@H]([C@@H]([C@@H](O1)O)O)O)O)O
PubChem439680
Formal Charge0
Total Atoms24
Total Chiral Atoms5
Total Bonds24
Total Aromatic Bonds0

CodeMAN
PDB ResiduesH:H:?4 H:H:?6 H:H:?13 H:H:?14
Environment DetailsOpen EMBL-EBI Page
CodeMAN
Namealpha-D-mannopyranose
Synonymsalpha-D-mannose; D-mannose; mannose
Identifier(2S,3S,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol
FormulaC6 H12 O6
Molecular Weight180.156
SMILESC([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)O
PubChem185698
Formal Charge0
Total Atoms24
Total Chiral Atoms5
Total Bonds24
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP02699
Sequence
>8FD0_poly_Chain_R
MNGTEGPNF YVPFSNKTG VVRSPFEAP QYYLAEPWQ FSMLAAYMF 
LLIMLGFPI NFLTLYVTV QHKKLRTPL NYILLNLAV ADLFMVFGG 
FTTTLYTSL HGYFVFGPT GCNLEGFFA TLGGEIALW SLVVLAIER 
YVVVCKPMS NFRNHAIMG VAFTWVMAL ACAAPPLVG WSRYIPEGM 
QCSCGIDYY TPHEETNNE SFVIYMFVV HFIIPLIVI FFCYGQLVF 
TVATTQKAE KEVTRMVII MVIAFLICW LPYAGVAFY IFTHQGSDF 
GPIFMTIPA FFAKTSAVY NPVIYIMMN KQFRNCMVT TLCC


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
1F88ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82000-08-0410.1126/science.289.5480.739
1GZMASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652003-11-2010.1016/j.jmb.2004.08.090
1HZXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82001-07-0410.1021/bi0155091
1L9HASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62002-05-1510.1073/pnas.082666399
1U19ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.22004-10-1210.1016/j.jmb.2004.07.044
2G87ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--2.62006-09-0210.1002/anie.200600595
2HPYASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--2.82006-08-2210.1073/pnas.0601765103
2I35ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.82006-10-1710.1073/pnas.0608022103
2I36ASensoryOpsinsRhodopsinBos taurus---4.12006-10-1710.1073/pnas.0608022103
2I37ASensoryOpsinsRhodopsinBos taurus---4.152006-10-1710.1073/pnas.0608022103
2J4YASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42007-09-2510.1016/j.jmb.2007.03.007
2PEDASensoryOpsinsRhodopsinBos taurus9-cis-Retinal--2.952007-10-3010.1529/biophysj.107.108225
2X72ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt(CT)32011-03-1610.1038/nature09795
2Z73ASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--2.52008-05-1310.1038/nature06925
2ZIYASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--3.72008-05-0610.1074/jbc.C800040200
3AYMASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-retinal--2.82011-08-1710.1016/j.jmb.2011.08.044
3AYNASensoryOpsinsRhodopsinTodarodes pacificus9-cis-Retinal--2.72011-08-1710.1016/j.jmb.2011.08.044
3C9LASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652008-08-0510.1107/S0907444908017162
3C9MASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42008-08-0510.1107/S0907444908017162
3CAPASensoryOpsinsRhodopsinBos taurus---2.92008-06-2410.1038/nature07063
3DQBASensoryOpsinsRhodopsinBos taurus--Gt(CT)3.22008-09-2310.1038/nature07330
3OAXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62011-01-1910.1016/j.bpj.2010.08.003
3PQRASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt(CT)2.852011-03-0910.1038/nature09789
3PXOASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--32011-03-0910.1038/nature09789
4A4MASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt(CT)3.32012-01-2510.1073/pnas.1114089108
4BEYASensoryOpsinsRhodopsinBos taurus--Gt(CT)2.92013-05-0810.1038/embor.2013.44
4BEZASensoryOpsinsRhodopsinBos taurus---3.32013-04-2410.1038/embor.2013.44
4J4QASensoryOpsinsRhodopsinBos taurusOctyl Beta-D-Glucopyranoside-Gt(CT)2.652013-10-3010.1002/anie.201302374
4PXFASensoryOpsinsRhodopsinBos taurusOctyl Beta-D-Glucopyranoside-Arrestin1_Finger_loop2.752014-09-1710.1038/ncomms5801
4WW3ASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-retinal--2.82015-06-1710.1371/journal.pone.0126970
4X1HASensoryOpsinsRhodopsinBos taurusNonyl Beta-D-Glucopyranoside-Gt(CT)2.292015-11-0410.1016/j.str.2015.09.015
4ZWJASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.32015-07-2910.1038/nature14656
5DGYASensoryOpsinsRhodopsinHomo sapiens--Arrestin17.72016-03-2310.1038/sdata.2016.21
5DYSASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--2.32016-08-1010.15252/embr.201642671
5EN0ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt(CT)2.812016-08-1010.15252/embr.201642671
5TE3ASensoryOpsinsRhodopsinBos taurusOctyl Beta-D-Glucopyranoside--2.72017-03-1510.1073/pnas.1617446114
5TE5ASensoryOpsinsRhodopsinBos taurus20-Methanoretinal--4.012017-03-1510.1073/pnas.1617446114
5W0PASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.012017-08-0910.1016/j.cell.2017.07.002
5WKTASensoryOpsinsRhodopsinBos taurusOctyl Beta-D-Glucopyranoside-Gt(CT)3.22017-12-1310.1038/nprot.2017.135
6CMOASensoryOpsinsRhodopsinHomo sapiens--Gi1/&β;1/&γ;24.52018-06-2010.1038/s41586-018-0215-y
6FK6ASensoryOpsinsRhodopsinBos taurus-PubChem 132473033-2.362018-04-0410.1073/pnas.1718084115
6FK7ASensoryOpsinsRhodopsinBos taurus-PubChem 132473034-2.622018-04-0410.1073/pnas.1718084115
6FK8ASensoryOpsinsRhodopsinBos taurus-PubChem 132473035-2.872018-04-0410.1073/pnas.1718084115
6FK9ASensoryOpsinsRhodopsinBos taurus-PubChem 132473036-2.632018-04-0410.1073/pnas.1718084115
6FKAASensoryOpsinsRhodopsinBos taurus-PubChem 132473037-2.72018-04-0410.1073/pnas.1718084115
6FKBASensoryOpsinsRhodopsinBos taurus-PubChem 132473038-3.032018-04-0410.1073/pnas.1718084115
6FKCASensoryOpsinsRhodopsinBos taurus-PubChem 132473039-2.462018-04-0410.1073/pnas.1718084115
6FKDASensoryOpsinsRhodopsinBos taurus-PubChem 137349183-2.492018-04-0410.1073/pnas.1718084115
6FUFASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Go/&β;1/&γ;23.122018-10-0310.1126/sciadv.aat7052
6I9KASensoryOpsinsRhodopsinHasarius adansoni9-cis-Retinal--2.152019-07-0310.1073/pnas.1902192116
6NWEASensoryOpsinsRhodopsinBos taurusOctyl Beta-D-Glucopyranoside-Gt(CT)2.712020-02-12To be published
6OFJASensoryOpsinsRhodopsinBos taurus---4.52019-08-2110.1074/jbc.RA119.010089
6OY9ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt/&β;1/&γ;13.92019-07-2410.1016/j.molcel.2019.06.007
6OYAASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt/&β;1/&γ;13.32019-07-2410.1016/j.molcel.2019.06.007
6PELASensoryOpsinsRhodopsinBos taurus-CitronellolGt(CT)3.192020-06-24To be published
6PGSASensoryOpsinsRhodopsinBos taurus-GeraniolGt(CT)2.92020-07-01To be published
6PH7ASensoryOpsinsRhodopsinBos taurus-NerolGt(CT)2.92020-07-01To be published
6QNOASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gi1/&β;1/&γ;14.382019-07-1010.7554/eLife.46041
7MT8ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-GRK15.82021-07-0710.1038/s41586-021-03721-x
7MT9ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-GRK172021-07-0710.1038/s41586-021-03721-x
7MTAASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-GRK14.12021-07-0710.1038/s41586-021-03721-x
7MTBASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-GRK142021-07-0710.1038/s41586-021-03721-x
7ZBCASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
7ZBEASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
8A6CASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--1.82023-03-2910.1038/s41586-023-05863-6
8A6DASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--1.82023-03-2910.1038/s41586-023-05863-6
8A6EASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--1.82023-03-2910.1038/s41586-023-05863-6
8FCZASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.72023-08-3010.1038/s41467-023-40911-9
8FD0ASensoryOpsinsRhodopsinBos taurus---3.712023-08-3010.1038/s41467-023-40911-9
8FD1ASensoryOpsinsRhodopsinBos taurus---4.252023-08-3010.1038/s41467-023-40911-9
3CAP (Dimer)ASensoryOpsinsRhodopsinBos taurus---2.92008-06-2410.1038/nature07063
6OFJ (Dimer)ASensoryOpsinsRhodopsinBos taurus---4.52019-08-2110.1074/jbc.RA119.010089
8FCZ (Dimer)ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.72023-08-3010.1038/s41467-023-40911-9
8FD0 (Dimer)ASensoryOpsinsRhodopsinBos taurus---3.712023-08-3010.1038/s41467-023-40911-9
8FD1 (Dimer)ASensoryOpsinsRhodopsinBos taurus---4.252023-08-3010.1038/s41467-023-40911-9




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8FD0_poly.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.