Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F9 8.9975407
2R:R:Y10 4.9175407
3R:R:V20 9.506536
4R:R:Y29 6.535404
5R:R:Y30 8.522534
6R:R:M44 6.0965147
7R:R:F52 9.9475406
8R:R:I75 6.045407
9R:R:F91 6.22754147
10R:R:Y96 12.085494
11R:R:F103 7.1585128
12R:R:E113 7.055405
13R:R:F115 7.412516
14R:R:I123 6.44407
15R:R:W126 9.73667655
16R:R:R135 8.25754159
17R:R:W175 9.85405
18R:R:R177 11.85475
19R:R:Y178 7.92286713
20R:R:E181 7.622514
21R:R:M183 6.88502
22R:R:I189 7.342514
23R:R:D190 12.6675474
24R:R:Y191 7.064516
25R:R:Y192 7.25515
26R:R:T193 8.232575
27R:R:H195 10.968574
28R:R:F203 10.7767616
29R:R:V210 7.33454
30R:R:H211 9.515656
31R:R:L226 5.2375408
32R:R:E247 4.4925157
33R:R:F261 6.7975409
34R:R:W265 7.418508
35R:R:Y268 6.1275416
36R:R:F287 7.895414
37R:R:Y306 13.218509
38R:R:M309 5.43254107
39R:R:N310 7.72408
40R:R:F313 10.7675408
41S:S:F9 8.9975407
42S:S:Y10 4.9175407
43S:S:V20 8.99546
44S:S:Y30 8.018544
45S:S:Y43 5.75404
46S:S:M44 6.0965197
47S:S:F52 8.7075406
48S:S:H65 7.81254215
49S:S:L68 4.21254217
50S:S:P71 5.505406
51S:S:Y74 7.21254225
52S:S:I75 6.045407
53S:S:F91 6.22754197
54S:S:Y96 10.74494
55S:S:F103 7.1585178
56S:S:E113 7.055405
57S:S:F115 7.412526
58S:S:I123 6.44407
59S:S:W126 9.54333665
60S:S:R135 5.6825409
61S:S:W175 10.0925405
62S:S:R177 10.9875485
63S:S:Y178 7.92286723
64S:S:E181 7.622524
65S:S:M183 6.88502
66S:S:I189 8.085424
67S:S:D190 12.0325484
68S:S:Y191 7.064526
69S:S:Y192 7.49525
70S:S:T193 8.232585
71S:S:H195 11.01584
72S:S:F203 10.535626
73S:S:V210 7.33464
74S:S:H211 9.515666
75S:S:E247 3.87407
76S:S:F261 7.6025409
77S:S:W265 7.56508
78S:S:Y268 6.1275426
79S:S:F276 9.37254234
80S:S:F287 8.1525424
81S:S:Y306 13.894509
82S:S:M309 5.43254247
83S:S:F313 9.8165208
84S:S:M317 4.86254206
85H:H:?1 18.4575430
86H:H:?3 32.345430
87H:H:?7 18.6454110
88H:H:?10 16.956540
89H:H:?15 18.74160
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:P23 R:R:Q184 10.150614.21NoNo053
2R:R:P12 R:R:Q184 11.42744.74NoNo083
3R:R:E181 R:R:Y192 30.872510.1YesYes145
4R:R:E181 R:R:S186 76.90545.75YesNo045
5R:R:F293 R:R:S186 77.09096.61NoNo055
6R:R:F293 R:R:L40 85.661215.83NoNo055
7R:R:L40 R:R:M183 86.41364.24NoYes052
8R:R:F37 R:R:M183 98.66067.46NoYes052
9R:R:F37 R:R:Y29 98.78529.28NoYes054
10R:R:P27 R:R:Y29 99.64158.34NoYes084
11R:R:P27 R:R:Y102 99.76165.56NoNo084
12R:R:F293 R:R:Y43 15.59315.16NoNo054
13R:R:L47 R:R:Y43 15.002514.07NoNo074
14R:R:L47 R:R:M44 14.71754.24NoYes077
15R:R:V104 R:R:Y102 99.881110.09NoNo044
16R:R:H100 R:R:V104 10011.07NoNo044
17R:R:H100 R:R:Y96 50.05917.42NoYes944
18R:R:Y96 S:S:H100 50.05337.62YesNo944
19S:S:H100 S:S:V104 99.985811.07NoNo044
20S:S:V104 S:S:Y102 99.861710.09NoNo044
21S:S:P27 S:S:Y102 99.73715.56NoNo084
22S:S:P27 S:S:Y29 99.48628.34NoNo084
23S:S:F37 S:S:Y29 99.23310.32NoNo054
24S:S:F37 S:S:M183 98.97757.46NoYes052
25S:S:L40 S:S:M183 85.92264.24NoYes052
26S:S:F293 S:S:L40 85.141715.83NoNo055
27S:S:F293 S:S:Y43 16.055.16NoYes054
28S:S:L47 S:S:Y43 14.868812.89NoYes074
29S:S:L47 S:S:M44 14.29874.24NoYes077
30R:R:H100 S:S:Y96 50.05854.36NoYes944
31S:S:H100 S:S:Y96 50.054516.33NoYes944
32R:R:I189 R:R:Y191 26.42918.46YesYes146
33R:R:F203 R:R:I189 15.210811.3YesYes164
34R:R:F203 R:R:W175 14.481121.05YesYes065
35R:R:W175 R:R:Y206 13.51758.68YesNo054
36R:R:H211 R:R:Y206 12.23311.98YesNo564
37R:R:H211 R:R:W126 11.08315.29YesYes565
38R:R:P291 R:R:V271 51.37623.53NoNo065
39R:R:P267 R:R:P291 50.24221.95NoNo096
40R:R:F294 R:R:P267 49.67612.89NoNo079
41R:R:F294 R:R:I263 49.11082.51NoNo075
42R:R:I259 R:R:I263 48.54671.47NoNo055
43R:R:I255 R:R:I259 47.9861.47NoNo055
44R:R:I255 R:R:R252 43.50926.26NoNo057
45R:R:I256 R:R:R252 42.947911.27NoNo057
46R:R:I256 R:R:M309 41.22174.37NoYes1057
47R:R:M253 R:R:M309 40.14498.66NoYes087
48R:R:M253 R:R:N310 21.0465.61NoYes088
49R:R:N310 R:R:Y306 19.15988.14YesYes089
50R:R:F313 R:R:Y306 10.187823.73YesYes089
51R:R:L72 R:R:M253 18.58884.24NoNo088
52R:R:L72 R:R:V250 17.99718.94NoNo088
53R:R:R135 R:R:V250 17.78575.23YesNo098
54R:R:I189 R:R:Y178 10.9154.84YesYes143
55R:R:E247 R:R:R135 10.82856.98YesYes1579
56R:R:E181 R:R:Y268 24.009210.1YesYes146
57R:R:M288 R:R:Y192 27.57164.79NoYes045
58R:R:M288 R:R:Y268 24.71134.79NoYes046
59R:R:M288 R:R:V271 51.59936.09NoNo045
60R:R:I286 R:R:M183 12.81065.83NoYes012
61R:R:I286 R:R:P285 12.49256.77NoNo013
62S:S:F293 S:S:S186 76.16126.61NoNo055
63S:S:E181 S:S:S186 75.97065.75YesNo045
64S:S:E181 S:S:Y192 26.883410.1YesYes245
65S:S:I286 S:S:M183 13.24245.83NoYes012
66S:S:I286 S:S:P285 12.92326.77NoNo013
67S:S:G182 S:S:P285 12.28942.03NoNo033
68S:S:G182 S:S:P12 11.98752.03NoNo038
69S:S:P12 S:S:Q184 11.84194.74NoNo083
70S:S:P23 S:S:Q184 10.58314.21NoNo053
71S:S:M288 S:S:Y192 22.92445.99NoYes045
72S:S:M288 S:S:V271 42.9326.09NoNo045
73S:S:P291 S:S:V271 42.59063.53NoNo065
74S:S:P267 S:S:P291 41.4141.95NoNo096
75S:S:F294 S:S:P267 40.82912.89NoNo079
76S:S:F294 S:S:I263 40.25612.51NoNo075
77S:S:I259 S:S:I263 39.68341.47NoNo055
78S:S:I255 S:S:I259 39.1111.47NoNo055
79S:S:I255 S:S:R252 38.54015.01NoNo057
80S:S:I256 S:S:R252 37.970211.27NoNo057
81S:S:I256 S:S:M309 36.80474.37NoYes2457
82S:S:M253 S:S:M309 35.69698.66NoYes087
83S:S:M253 S:S:N310 33.96835.61NoNo088
84S:S:N310 S:S:Y306 31.1616.98NoYes089
85S:S:F313 S:S:Y306 19.554424.76YesYes089
86S:S:E181 S:S:Y268 20.172910.1YesYes246
87S:S:M288 S:S:Y268 20.70974.79NoYes046
88S:S:E181 S:S:Y191 28.71465.61YesYes246
89S:S:I189 S:S:Y191 33.44498.46YesYes246
90S:S:I189 S:S:Y178 20.47954.84YesYes243
91S:S:F115 S:S:Y178 18.49646.19YesYes263
92S:S:F115 S:S:L119 16.67428.53YesNo065
93S:S:I123 S:S:L119 16.0624.28YesNo075
94S:S:I123 S:S:W161 15.146211.74YesNo079
95S:S:N78 S:S:W161 14.23137.91NoNo099
96S:S:N78 S:S:V157 13.26295.91NoNo097
97S:S:I75 S:S:V157 12.95796.14YesNo077
98S:S:I75 S:S:L131 12.40035.71YesNo079
99S:S:L131 S:S:V254 12.09488.94NoNo098
100S:S:R135 S:S:V254 11.78955.23YesNo098
101S:S:F203 S:S:I189 13.698411.3YesYes264
102S:S:F203 S:S:W175 12.324121.05YesYes065
103S:S:W175 S:S:Y206 11.22919.65YesNo054
104R:R:G182 R:R:P285 11.86092.03NoNo033
105R:R:G182 R:R:P12 11.56112.03NoNo038
106R:R:E181 R:R:Y191 21.84055.61YesYes146
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8FD1_poly
Class A
SubFamily Sensory
Type Opsins
SubType Rhodopsin
Species Bos Taurus
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 4.25
Date 2023-08-30
D.O.I. 10.1038/s41467-023-40911-9
Net Summary
Imin 4.23
Number of Linked Nodes 613
Number of Links 691
Number of Hubs 89
Number of Links mediated by Hubs 351
Number of Communities 24
Number of Nodes involved in Communities 133
Number of Links involved in Communities 169
Path Summary
Number Of Nodes in MetaPath 107
Number Of Links MetaPath 106
Number of Shortest Paths 500707
Length Of Smallest Path 3
Average Path Length 35.8277
Length of Longest Path 72
Minimum Path Strength 1.405
Average Path Strength 7.58334
Maximum Path Strength 36.74
Minimum Path Correlation 0.7
Average Path Correlation 0.975044
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 2.12766
Average % Of Corr. Nodes 56.0585
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 30.226
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNAG
PDB ResiduesH:H:?1 H:H:?2 H:H:?5 H:H:?7 H:H:?8 H:H:?10 H:H:?11 H:H:?15 H:H:?16
Environment DetailsOpen EMBL-EBI Page
CodeNAG
NameN-Acetylglucosamine
SynonymsN-Acetyl-D-glucosamine
IdentifierN-[(2R,3R,4R,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]ethanamide
FormulaC8 H15 N O6
Molecular Weight221.208
SMILESCC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
PubChem24139
Formal Charge0
Total Atoms30
Total Chiral Atoms5
Total Bonds30
Total Aromatic Bonds0

CodeBMA
PDB ResiduesH:H:?3 H:H:?9 H:H:?12
Environment DetailsOpen EMBL-EBI Page
CodeBMA
Namebeta-D-mannopyranose
Synonymsbeta-D-mannose; D-mannose; mannose
Identifier(2R,3S,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol
FormulaC6 H12 O6
Molecular Weight180.156
SMILESC([C@@H]1[C@H]([C@@H]([C@@H]([C@@H](O1)O)O)O)O)O
PubChem439680
Formal Charge0
Total Atoms24
Total Chiral Atoms5
Total Bonds24
Total Aromatic Bonds0

CodeMAN
PDB ResiduesH:H:?4 H:H:?6 H:H:?13 H:H:?14
Environment DetailsOpen EMBL-EBI Page
CodeMAN
Namealpha-D-mannopyranose
Synonymsalpha-D-mannose; D-mannose; mannose
Identifier(2S,3S,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol
FormulaC6 H12 O6
Molecular Weight180.156
SMILESC([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)O
PubChem185698
Formal Charge0
Total Atoms24
Total Chiral Atoms5
Total Bonds24
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP02699
Sequence
>8FD1_poly_Chain_R
MNGTEGPNF YVPFSNKTG VVRSPFEAP QYYLAEPWQ FSMLAAYMF 
LLIMLGFPI NFLTLYVTV QTPLNYILL NLAVADLFM VFGGFTTTL 
YTSLHGYFV FGPTGCNLE GFFATLGGE IALWSLVVL AIERYVVVC 
KPMSNFRNH AIMGVAFTW VMALACAAP PLVGWSRYI PEGMQCSCG 
IDYYTPHEE TNNESFVIY MFVVHFIIP LIVIFFCYG QLVFTVATT 
QKAEKEVTR MVIIMVIAF LICWLPYAG VAFYIFTHQ GSDFGPIFM 
TIPAFFAKT SAVYNPVIY IMMNKQFRN CMVTTLCC


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
1F88ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82000-08-0410.1126/science.289.5480.739
1GZMASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652003-11-2010.1016/j.jmb.2004.08.090
1HZXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82001-07-0410.1021/bi0155091
1L9HASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62002-05-1510.1073/pnas.082666399
1U19ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.22004-10-1210.1016/j.jmb.2004.07.044
2G87ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--2.62006-09-0210.1002/anie.200600595
2HPYASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--2.82006-08-2210.1073/pnas.0601765103
2I35ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.82006-10-1710.1073/pnas.0608022103
2I36ASensoryOpsinsRhodopsinBos taurus---4.12006-10-1710.1073/pnas.0608022103
2I37ASensoryOpsinsRhodopsinBos taurus---4.152006-10-1710.1073/pnas.0608022103
2J4YASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42007-09-2510.1016/j.jmb.2007.03.007
2PEDASensoryOpsinsRhodopsinBos taurus9-cis-Retinal--2.952007-10-3010.1529/biophysj.107.108225
2X72ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt(CT)32011-03-1610.1038/nature09795
2Z73ASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--2.52008-05-1310.1038/nature06925
2ZIYASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--3.72008-05-0610.1074/jbc.C800040200
3AYMASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-retinal--2.82011-08-1710.1016/j.jmb.2011.08.044
3AYNASensoryOpsinsRhodopsinTodarodes pacificus9-cis-Retinal--2.72011-08-1710.1016/j.jmb.2011.08.044
3C9LASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652008-08-0510.1107/S0907444908017162
3C9MASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42008-08-0510.1107/S0907444908017162
3CAPASensoryOpsinsRhodopsinBos taurus---2.92008-06-2410.1038/nature07063
3DQBASensoryOpsinsRhodopsinBos taurus--Gt(CT)3.22008-09-2310.1038/nature07330
3OAXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62011-01-1910.1016/j.bpj.2010.08.003
3PQRASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt(CT)2.852011-03-0910.1038/nature09789
3PXOASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--32011-03-0910.1038/nature09789
4A4MASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt(CT)3.32012-01-2510.1073/pnas.1114089108
4BEYASensoryOpsinsRhodopsinBos taurus--Gt(CT)2.92013-05-0810.1038/embor.2013.44
4BEZASensoryOpsinsRhodopsinBos taurus---3.32013-04-2410.1038/embor.2013.44
4J4QASensoryOpsinsRhodopsinBos taurusOctyl Beta-D-Glucopyranoside-Gt(CT)2.652013-10-3010.1002/anie.201302374
4PXFASensoryOpsinsRhodopsinBos taurusOctyl Beta-D-Glucopyranoside-Arrestin1_Finger_loop2.752014-09-1710.1038/ncomms5801
4WW3ASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-retinal--2.82015-06-1710.1371/journal.pone.0126970
4X1HASensoryOpsinsRhodopsinBos taurusNonyl Beta-D-Glucopyranoside-Gt(CT)2.292015-11-0410.1016/j.str.2015.09.015
4ZWJASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.32015-07-2910.1038/nature14656
5DGYASensoryOpsinsRhodopsinHomo sapiens--Arrestin17.72016-03-2310.1038/sdata.2016.21
5DYSASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--2.32016-08-1010.15252/embr.201642671
5EN0ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt(CT)2.812016-08-1010.15252/embr.201642671
5TE3ASensoryOpsinsRhodopsinBos taurusOctyl Beta-D-Glucopyranoside--2.72017-03-1510.1073/pnas.1617446114
5TE5ASensoryOpsinsRhodopsinBos taurus20-Methanoretinal--4.012017-03-1510.1073/pnas.1617446114
5W0PASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.012017-08-0910.1016/j.cell.2017.07.002
5WKTASensoryOpsinsRhodopsinBos taurusOctyl Beta-D-Glucopyranoside-Gt(CT)3.22017-12-1310.1038/nprot.2017.135
6CMOASensoryOpsinsRhodopsinHomo sapiens--Gi1/&β;1/&γ;24.52018-06-2010.1038/s41586-018-0215-y
6FK6ASensoryOpsinsRhodopsinBos taurus-PubChem 132473033-2.362018-04-0410.1073/pnas.1718084115
6FK7ASensoryOpsinsRhodopsinBos taurus-PubChem 132473034-2.622018-04-0410.1073/pnas.1718084115
6FK8ASensoryOpsinsRhodopsinBos taurus-PubChem 132473035-2.872018-04-0410.1073/pnas.1718084115
6FK9ASensoryOpsinsRhodopsinBos taurus-PubChem 132473036-2.632018-04-0410.1073/pnas.1718084115
6FKAASensoryOpsinsRhodopsinBos taurus-PubChem 132473037-2.72018-04-0410.1073/pnas.1718084115
6FKBASensoryOpsinsRhodopsinBos taurus-PubChem 132473038-3.032018-04-0410.1073/pnas.1718084115
6FKCASensoryOpsinsRhodopsinBos taurus-PubChem 132473039-2.462018-04-0410.1073/pnas.1718084115
6FKDASensoryOpsinsRhodopsinBos taurus-PubChem 137349183-2.492018-04-0410.1073/pnas.1718084115
6FUFASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Go/&β;1/&γ;23.122018-10-0310.1126/sciadv.aat7052
6I9KASensoryOpsinsRhodopsinHasarius adansoni9-cis-Retinal--2.152019-07-0310.1073/pnas.1902192116
6NWEASensoryOpsinsRhodopsinBos taurusOctyl Beta-D-Glucopyranoside-Gt(CT)2.712020-02-12To be published
6OFJASensoryOpsinsRhodopsinBos taurus---4.52019-08-2110.1074/jbc.RA119.010089
6OY9ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt/&β;1/&γ;13.92019-07-2410.1016/j.molcel.2019.06.007
6OYAASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gt/&β;1/&γ;13.32019-07-2410.1016/j.molcel.2019.06.007
6PELASensoryOpsinsRhodopsinBos taurus-CitronellolGt(CT)3.192020-06-24To be published
6PGSASensoryOpsinsRhodopsinBos taurus-GeraniolGt(CT)2.92020-07-01To be published
6PH7ASensoryOpsinsRhodopsinBos taurus-NerolGt(CT)2.92020-07-01To be published
6QNOASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-Gi1/&β;1/&γ;14.382019-07-1010.7554/eLife.46041
7MT8ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-GRK15.82021-07-0710.1038/s41586-021-03721-x
7MT9ASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-GRK172021-07-0710.1038/s41586-021-03721-x
7MTAASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-GRK14.12021-07-0710.1038/s41586-021-03721-x
7MTBASensoryOpsinsRhodopsinBos taurusAll-trans-retinal-GRK142021-07-0710.1038/s41586-021-03721-x
7ZBCASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
7ZBEASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
8A6CASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--1.82023-03-2910.1038/s41586-023-05863-6
8A6DASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--1.82023-03-2910.1038/s41586-023-05863-6
8A6EASensoryOpsinsRhodopsinBos taurusAll-trans-retinal--1.82023-03-2910.1038/s41586-023-05863-6
8FCZASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.72023-08-3010.1038/s41467-023-40911-9
8FD0ASensoryOpsinsRhodopsinBos taurus---3.712023-08-3010.1038/s41467-023-40911-9
8FD1ASensoryOpsinsRhodopsinBos taurus---4.252023-08-3010.1038/s41467-023-40911-9
3CAP (Dimer)ASensoryOpsinsRhodopsinBos taurus---2.92008-06-2410.1038/nature07063
6OFJ (Dimer)ASensoryOpsinsRhodopsinBos taurus---4.52019-08-2110.1074/jbc.RA119.010089
8FCZ (Dimer)ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.72023-08-3010.1038/s41467-023-40911-9
8FD0 (Dimer)ASensoryOpsinsRhodopsinBos taurus---3.712023-08-3010.1038/s41467-023-40911-9
8FD1 (Dimer)ASensoryOpsinsRhodopsinBos taurus---4.252023-08-3010.1038/s41467-023-40911-9




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8FD1_poly.zip



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