Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1H:H:?1 17.49420
2H:H:?7 18.125400
3H:H:?10 12.7583610
4L:L:?1 7.878181120
5M:M:?1 7.571671210
6R:R:F9 8.28427
7R:R:Y10 3.974527
8R:R:V11 3.82333628
9R:R:N15 12.7825427
10R:R:V20 9.485426
11R:R:S22 7.4275425
12R:R:P23 7.18625
13R:R:F24 5.89405
14R:R:Q28 8.0825425
15R:R:Y30 6.93624
16R:R:L31 5.582524
17R:R:M44 6.684527
18R:R:M49 3.78167605
19R:R:F52 6.876506
20R:R:N55 6.80754129
21R:R:H65 6.065435
22R:R:L68 5.23637
23R:R:L72 4.88538
24R:R:N73 6.265438
25R:R:N78 7.8225479
26R:R:M86 4.82407
27R:R:F91 5.464527
28R:R:T93 2.29405
29R:R:Y96 8.876554
30R:R:F103 7.85428
31R:R:E113 5.85725
32R:R:F115 6.86526
33R:R:F116 5.5825404
34R:R:E122 7.078526
35R:R:I123 4.72667677
36R:R:W126 8.035625
37R:R:R135 8.875669
38R:R:Y136 5.5407
39R:R:V138 7.16468
40R:R:T160 5.0975477
41R:R:P170 4.0225427
42R:R:P171 6.535425
43R:R:W175 8.358525
44R:R:R177 9.266525
45R:R:Y178 6.26714723
46R:R:P180 5.6523
47R:R:E181 7.284524
48R:R:M183 6.28402
49R:R:Q184 6.996523
50R:R:C187 5.2675429
51R:R:I189 5.98333624
52R:R:D190 10.316524
53R:R:Y191 7.31333626
54R:R:Y192 6.50833625
55R:R:T193 7.25667625
56R:R:H195 9.428524
57R:R:N200 6.135424
58R:R:F203 8.14429726
59R:R:Y206 10.47424
60R:R:M207 5.245425
61R:R:H211 8.465626
62R:R:P215 6.8225429
63R:R:M253 4.6775438
64R:R:F261 8.4975409
65R:R:W265 10.4067608
66R:R:Y268 11.235426
67R:R:V271 6.2375425
68R:R:I275 5.402524
69R:R:F276 7.295404
70R:R:F283 5.845424
71R:R:P285 3.6025403
72R:R:F287 7.0325424
73R:R:M288 4.456524
74R:R:F293 9.43425
75R:R:K296 6.81627
76R:R:Y301 8.855405
77R:R:I305 3.2875438
78R:R:Y306 11.988539
79R:R:I307 4.82437
80R:R:M309 5.4375437
81R:R:F313 8.6638
82R:R:R314 8.375438
83S:S:F9 8.5525417
84S:S:Y10 4.172517
85S:S:V11 3.82333618
86S:S:N15 10.292517
87S:S:V20 8.39516
88S:S:S22 7.4275415
89S:S:P23 7.18615
90S:S:F24 5.014505
91S:S:Q28 8.0825415
92S:S:Y30 6.93614
93S:S:L31 5.582514
94S:S:M44 6.966517
95S:S:I48 4.2075406
96S:S:M49 6.765405
97S:S:F52 5.5425406
98S:S:N55 6.80754169
99S:S:H65 6.065445
100S:S:L68 5.02547
101S:S:P71 6.0125406
102S:S:L72 5.0625448
103S:S:N73 6.265448
104S:S:Y74 9.16754185
105S:S:N78 7.8225499
106S:S:M86 4.82407
107S:S:F91 5.464517
108S:S:T93 2.29405
109S:S:Y96 8.222554
110S:S:F103 7.85418
111S:S:E113 5.85715
112S:S:F115 6.86516
113S:S:F116 5.5825404
114S:S:E122 7.324516
115S:S:I123 4.72667697
116S:S:L125 7.005417
117S:S:W126 8.61667615
118S:S:R135 8.875689
119S:S:T160 5.0975497
120S:S:P170 4.0225417
121S:S:P171 5.94515
122S:S:W175 8.358515
123S:S:S176 6.0975415
124S:S:R177 11.1925415
125S:S:Y178 6.26714713
126S:S:P180 5.6513
127S:S:E181 7.958514
128S:S:M183 6.28402
129S:S:Q184 6.996513
130S:S:C187 5.2675419
131S:S:I189 6.22667614
132S:S:D190 12.68414
133S:S:Y191 6.43716
134S:S:Y192 7.73615
135S:S:T193 8.168515
136S:S:F203 8.29143716
137S:S:Y206 10.0975414
138S:S:M207 5.136515
139S:S:H211 8.724516
140S:S:F212 5.438518
141S:S:P215 6.8225419
142S:S:M253 4.6775448
143S:S:F261 7.442519
144S:S:W265 10.2817608
145S:S:Y268 11.04416
146S:S:V271 6.68415
147S:S:I275 5.886514
148S:S:F276 7.8775414
149S:S:F283 5.845414
150S:S:P285 3.6025403
151S:S:F287 7.0325414
152S:S:M288 4.71167614
153S:S:F293 9.43415
154S:S:K296 6.81617
155S:S:Y301 8.855405
156S:S:I305 3.2875448
157S:S:Y306 12.69549
158S:S:F313 9.346548
159S:S:C322 4.4475434
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:L31 R:R:P285 19.1084.93YesYes043
2R:R:I286 R:R:P285 18.90023.39NoYes013
3R:R:I286 R:R:M183 99.42132.92NoYes012
4R:R:F37 R:R:M183 99.78029.95NoYes052
5R:R:F37 R:R:Y29 99.76038.25NoNo1054
6R:R:P27 R:R:Y29 99.91258.34NoNo084
7R:R:P27 R:R:Y102 99.95638.34NoNo084
8R:R:V104 R:R:Y102 1008.83NoNo044
9R:R:V104 R:R:Y96 50.92395.05NoYes544
10R:R:Y96 S:S:Y96 49.16143.97YesYes544
11S:S:F105 S:S:Y96 95.0310.32NoYes074
12S:S:F105 S:S:G106 94.95191.51NoNo078
13S:S:F24 S:S:G106 94.80221.51YesNo058
14R:R:H100 R:R:V104 49.11966.92NoNo544
15R:R:H100 S:S:Y96 49.1085.44NoYes544
16S:S:F24 S:S:P180 12.22935.78YesYes053
17L:L:?1 R:R:T118 20.47637.84YesNo004
18L:L:?1 R:R:W265 38.759915.9YesYes008
19L:L:?1 R:R:Y268 64.241717.93YesYes206
20S:S:F103 S:S:F24 75.27335.36YesYes085
21S:S:E113 S:S:F103 74.80943.5YesYes158
22M:M:?1 S:S:E113 57.49086.17YesYes105
23M:M:?1 S:S:T118 12.21968.82YesNo004
24M:M:?1 S:S:F212 13.16428.1YesYes108
25M:M:?1 S:S:W265 24.116915.15YesYes008
26R:R:A168 R:R:T118 19.09563.36NoNo074
27R:R:A168 R:R:L119 18.97023.15NoNo075
28R:R:I123 R:R:L119 21.05724.28YesNo075
29R:R:I123 R:R:T160 20.26663.04YesYes777
30R:R:S127 R:R:T160 20.17766.4NoYes087
31R:R:I75 R:R:S127 56.39834.64NoNo078
32R:R:I75 R:R:L131 55.29334.28NoNo079
33R:R:L131 R:R:V254 54.92468.94NoNo098
34R:R:R135 R:R:V254 54.55595.23YesNo098
35R:R:R135 R:R:V250 44.481911.77YesNo098
36R:R:L72 R:R:V250 44.10978.94YesNo088
37R:R:L72 R:R:N73 24.73944.12YesYes388
38R:R:F261 R:R:W265 19.270914.03YesYes098
39R:R:F261 R:R:Y301 18.98954.13YesYes095
40R:R:N302 R:R:Y301 37.106123.26NoYes095
41R:R:L79 R:R:N302 36.85495.49NoNo099
42R:R:L79 R:R:S127 36.60843NoNo098
43R:R:C264 R:R:W265 18.742410.45NoYes088
44R:R:C264 R:R:Y301 18.62114.03NoYes085
45R:R:N73 R:R:Y306 14.51328.14YesYes389
46R:R:F313 R:R:Y306 12.979324.76YesYes389
47R:R:L72 R:R:L76 15.22344.15YesNo088
48R:R:L76 R:R:Y306 14.489118.76NoYes089
49R:R:I307 R:R:Y306 13.73913.63YesYes379
50R:R:P291 R:R:V271 80.33445.3NoYes065
51R:R:I286 R:R:I290 80.8212.94NoNo015
52R:R:I290 R:R:P291 80.7573.39NoNo056
53R:R:I307 R:R:R314 10.71126.26YesYes378
54S:S:A168 S:S:T118 11.97433.36NoNo074
55S:S:A168 S:S:L119 11.82653.15NoNo075
56S:S:I123 S:S:L119 23.21164.28YesNo075
57S:S:I123 S:S:T160 21.46613.04YesYes977
58S:S:S127 S:S:T160 21.19956.4NoYes087
59S:S:I75 S:S:S127 52.89824.64NoNo078
60S:S:I75 S:S:L131 50.70854.28NoNo079
61S:S:L131 S:S:V254 49.97848.94NoNo098
62S:S:R135 S:S:V254 49.24815.23YesNo098
63S:S:R135 S:S:V250 36.03911.77YesNo098
64S:S:L72 S:S:V250 35.30688.94YesNo088
65S:S:L72 S:S:N73 27.2264.12YesYes488
66S:S:N73 S:S:Y306 19.90228.14YesYes489
67S:S:F313 S:S:Y306 13.283124.76YesYes489
68S:S:E113 S:S:G114 13.13913.27YesNo055
69S:S:G114 S:S:Y178 12.99785.79NoYes053
70S:S:F115 S:S:Y178 12.75135.16YesYes163
71S:S:F115 S:S:L119 11.67487.31YesNo065
72S:S:F212 S:S:F261 11.99583.22YesYes189
73S:S:F261 S:S:Y301 22.83414.13YesYes095
74S:S:N302 S:S:Y301 33.335223.26NoYes095
75S:S:L79 S:S:N302 32.88625.49NoNo099
76S:S:L79 S:S:S127 32.45113NoNo098
77S:S:F261 S:S:W265 12.173314.03YesYes098
78S:S:C264 S:S:W265 11.554110.45NoYes088
79S:S:C264 S:S:Y301 11.40524.03NoYes085
80R:R:M288 R:R:V271 71.17086.09YesYes245
81R:R:M288 R:R:Y268 67.4795.99YesYes246
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
M:M:?1 S:S:E113 6.17 1 Yes Yes 0 5 0 1
M:M:?1 S:S:A117 5.24 1 Yes No 0 5 0 1
M:M:?1 S:S:T118 8.82 1 Yes No 0 4 0 1
M:M:?1 S:S:E122 7.93 1 Yes Yes 0 6 0 1
M:M:?1 S:S:S186 3 1 Yes No 0 5 0 1
M:M:?1 S:S:Y191 3.12 1 Yes Yes 0 6 0 1
M:M:?1 S:S:M207 6.58 1 Yes Yes 0 5 0 1
M:M:?1 S:S:F212 8.1 1 Yes Yes 0 8 0 1
M:M:?1 S:S:W265 15.15 1 Yes Yes 0 8 0 1
M:M:?1 S:S:Y268 17.15 1 Yes Yes 0 6 0 1
M:M:?1 S:S:K296 7.5 1 Yes Yes 0 7 0 1
S:S:F91 S:S:M44 8.71 1 Yes Yes 7 7 2 2
S:S:M44 S:S:T94 9.03 1 Yes No 7 7 2 2
S:S:K296 S:S:M44 7.2 1 Yes Yes 7 7 1 2
S:S:F91 S:S:K296 3.72 1 Yes Yes 7 7 2 1
S:S:E113 S:S:T94 12.7 1 Yes No 5 7 1 2
S:S:E113 S:S:F103 3.5 1 Yes Yes 5 8 1 2
S:S:C187 S:S:F103 6.98 1 Yes Yes 9 8 2 2
S:S:E113 S:S:G114 3.27 1 Yes No 5 5 1 2
S:S:C187 S:S:E113 3.04 1 Yes Yes 9 5 2 1
S:S:E113 S:S:K296 9.45 1 Yes Yes 5 7 1 1
S:S:G114 S:S:Y178 5.79 0 No Yes 5 3 2 2
S:S:A168 S:S:T118 3.36 0 No No 7 4 2 1
S:S:T118 S:S:Y178 8.74 0 No Yes 4 3 1 2
S:S:G121 S:S:W265 5.63 0 No Yes 7 8 2 1
S:S:E122 S:S:L125 3.98 1 Yes Yes 6 7 1 2
S:S:E122 S:S:W126 5.45 1 Yes Yes 6 5 1 2
S:S:C167 S:S:E122 10.64 1 No Yes 5 6 2 1
S:S:E122 S:S:H211 8.62 1 Yes Yes 6 6 1 2
S:S:F212 S:S:L125 4.87 1 Yes Yes 8 7 1 2
S:S:F261 S:S:L125 10.96 1 Yes Yes 9 7 2 2
S:S:H211 S:S:W126 3.17 1 Yes Yes 6 5 2 2
S:S:C167 S:S:M207 3.24 1 No Yes 5 5 2 1
S:S:C167 S:S:H211 14.74 1 No Yes 5 6 2 2
S:S:I189 S:S:Y178 6.04 1 Yes Yes 4 3 2 2
S:S:E181 S:S:Y191 5.61 1 Yes Yes 4 6 2 1
S:S:E181 S:S:Y192 13.47 1 Yes Yes 4 5 2 2
S:S:E181 S:S:Y268 10.1 1 Yes Yes 4 6 2 1
S:S:E181 S:S:M288 4.06 1 Yes Yes 4 4 2 2
S:S:F293 S:S:S186 6.61 1 Yes No 5 5 2 1
S:S:K296 S:S:S186 3.06 1 Yes No 7 5 1 1
S:S:I189 S:S:Y191 8.46 1 Yes Yes 4 6 2 1
S:S:F203 S:S:I189 7.54 1 Yes Yes 6 4 2 2
S:S:I189 S:S:M207 7.29 1 Yes Yes 4 5 2 1
S:S:Y191 S:S:Y192 3.97 1 Yes Yes 6 5 1 2
S:S:M207 S:S:Y191 3.59 1 Yes Yes 5 6 1 1
S:S:Y191 S:S:Y268 10.92 1 Yes Yes 6 6 1 1
S:S:A272 S:S:Y191 9.34 0 No Yes 5 6 2 1
S:S:M288 S:S:Y192 5.99 1 Yes Yes 4 5 2 2
S:S:F203 S:S:M207 4.98 1 Yes Yes 6 5 2 1
S:S:F212 S:S:L216 9.74 1 Yes No 8 7 1 2
S:S:F212 S:S:F261 3.22 1 Yes Yes 8 9 1 2
S:S:F261 S:S:W265 14.03 1 Yes Yes 9 8 2 1
S:S:C264 S:S:W265 10.45 0 No Yes 8 8 2 1
S:S:A295 S:S:W265 7.78 0 No Yes 8 8 2 1
S:S:S298 S:S:W265 8.65 0 No Yes 9 8 2 1
S:S:M288 S:S:Y268 5.99 1 Yes Yes 4 6 2 1
S:S:F293 S:S:K296 9.93 1 Yes Yes 5 7 2 1
S:S:E113 S:S:T93 2.82 1 Yes Yes 5 5 1 2
M:M:?1 S:S:A269 2.1 1 Yes No 0 7 0 1
S:S:F212 S:S:I213 1.26 1 Yes No 8 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:E113 6.17 2 Yes Yes 0 5 0 1
L:L:?1 R:R:A117 4.19 2 Yes No 0 5 0 1
L:L:?1 R:R:T118 7.84 2 Yes No 0 4 0 1
L:L:?1 R:R:E122 7.93 2 Yes Yes 0 6 0 1
L:L:?1 R:R:S186 3 2 Yes No 0 5 0 1
L:L:?1 R:R:M207 6.58 2 Yes Yes 0 5 0 1
L:L:?1 R:R:F212 6.48 2 Yes No 0 8 0 1
L:L:?1 R:R:W265 15.9 2 Yes Yes 0 8 0 1
L:L:?1 R:R:Y268 17.93 2 Yes Yes 0 6 0 1
L:L:?1 R:R:A269 3.14 2 Yes No 0 7 0 1
L:L:?1 R:R:K296 7.5 2 Yes Yes 0 7 0 1
R:R:F91 R:R:M44 8.71 2 Yes Yes 7 7 2 2
R:R:M44 R:R:T94 9.03 2 Yes No 7 7 2 2
R:R:K296 R:R:M44 7.2 2 Yes Yes 7 7 1 2
R:R:F91 R:R:K296 3.72 2 Yes Yes 7 7 2 1
R:R:E113 R:R:T94 12.7 2 Yes No 5 7 1 2
R:R:E113 R:R:F103 3.5 2 Yes Yes 5 8 1 2
R:R:C187 R:R:F103 6.98 2 Yes Yes 9 8 2 2
R:R:E113 R:R:G114 3.27 2 Yes No 5 5 1 2
R:R:C187 R:R:E113 3.04 2 Yes Yes 9 5 2 1
R:R:E113 R:R:K296 9.45 2 Yes Yes 5 7 1 1
R:R:G114 R:R:Y178 5.79 0 No Yes 5 3 2 2
R:R:A168 R:R:T118 3.36 0 No No 7 4 2 1
R:R:T118 R:R:Y178 8.74 0 No Yes 4 3 1 2
R:R:G121 R:R:W265 5.63 0 No Yes 7 8 2 1
R:R:E122 R:R:L125 3.98 2 Yes No 6 7 1 2
R:R:E122 R:R:W126 5.45 2 Yes Yes 6 5 1 2
R:R:C167 R:R:E122 10.64 2 No Yes 5 6 2 1
R:R:E122 R:R:H211 7.39 2 Yes Yes 6 6 1 2
R:R:F261 R:R:L125 10.96 0 Yes No 9 7 2 2
R:R:H211 R:R:W126 3.17 2 Yes Yes 6 5 2 2
R:R:C167 R:R:H211 16.22 2 No Yes 5 6 2 2
R:R:I189 R:R:Y178 6.04 2 Yes Yes 4 3 2 2
R:R:E181 R:R:Y191 5.61 2 Yes Yes 4 6 2 2
R:R:E181 R:R:Y268 10.1 2 Yes Yes 4 6 2 1
R:R:E181 R:R:M288 4.06 2 Yes Yes 4 4 2 2
R:R:F293 R:R:S186 6.61 2 Yes No 5 5 2 1
R:R:K296 R:R:S186 3.06 2 Yes No 7 5 1 1
R:R:I189 R:R:Y191 8.46 2 Yes Yes 4 6 2 2
R:R:F203 R:R:I189 7.54 2 Yes Yes 6 4 2 2
R:R:I189 R:R:M207 5.83 2 Yes Yes 4 5 2 1
R:R:M207 R:R:Y191 3.59 2 Yes Yes 5 6 1 2
R:R:Y191 R:R:Y268 10.92 2 Yes Yes 6 6 2 1
R:R:F203 R:R:M207 4.98 2 Yes Yes 6 5 2 1
R:R:F212 R:R:I213 7.54 0 No No 8 4 1 2
R:R:F212 R:R:L216 4.87 0 No No 8 7 1 2
R:R:F261 R:R:W265 14.03 0 Yes Yes 9 8 2 1
R:R:C264 R:R:W265 10.45 0 No Yes 8 8 2 1
R:R:A295 R:R:W265 7.78 0 No Yes 8 8 2 1
R:R:S298 R:R:W265 8.65 0 No Yes 9 8 2 1
R:R:M288 R:R:Y268 5.99 2 Yes Yes 4 6 2 1
R:R:F293 R:R:K296 9.93 2 Yes Yes 5 7 2 1
R:R:E113 R:R:T93 2.82 2 Yes Yes 5 5 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8FCZ_poly
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.92
Number of Linked Nodes 605
Number of Links 805
Number of Hubs 159
Number of Links mediated by Hubs 548
Number of Communities 18
Number of Nodes involved in Communities 226
Number of Links involved in Communities 361
Path Summary
Number Of Nodes in MetaPath 82
Number Of Links MetaPath 81
Number of Shortest Paths 1778995
Length Of Smallest Path 3
Average Path Length 34.2591
Length of Longest Path 65
Minimum Path Strength 1.43
Average Path Strength 6.78249
Maximum Path Strength 37.145
Minimum Path Correlation 0.7
Average Path Correlation 0.984196
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 3.33333
Average % Of Corr. Nodes 49.8402
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 48.3106
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• opsin binding   • protein binding   • binding   • arrestin family protein binding   • G protein-coupled photoreceptor activity   • molecular transducer activity   • photoreceptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • vitamin binding   • retinal binding   • isoprenoid binding   • retinoid binding   • lipid binding   • 11-cis retinal binding   • small molecule binding   • G-protein alpha-subunit binding   • enzyme regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • hydrolase activity   • guanyl ribonucleotide binding   • GDP binding   • purine ribonucleotide binding   • ion binding   • ribonucleoside triphosphate phosphatase activity   • anion binding   • molecular function regulator activity   • heterocyclic compound binding   • carbohydrate derivative binding   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • ribonucleotide binding   • pyrophosphatase activity   • GTPase activity   • nucleoside-triphosphatase regulator activity   • GTPase regulator activity   • purine ribonucleoside triphosphate binding   • guanyl-nucleotide exchange factor activity   • nucleoside phosphate binding   • purine nucleotide binding   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • cation binding   • transition metal ion binding   • zinc ion binding   • metal ion binding   • identical protein binding   • multicellular organismal process   • rod bipolar cell differentiation   • cellular developmental process   • sensory organ development   • retina development in camera-type eye   • visual system development   • neural retina development   • neurogenesis   • multicellular organism development   • eye morphogenesis   • neuron differentiation   • cell differentiation   • anatomical structure development   • animal organ morphogenesis
Gene OntologyBiological Process• multicellular organismal process   • rod bipolar cell differentiation   • cellular developmental process   • sensory organ development   • retina development in camera-type eye   • visual system development   • neural retina development   • neurogenesis   • multicellular organism development   • eye morphogenesis   • neuron differentiation   • cell differentiation   • anatomical structure development   • animal organ morphogenesis   • sensory system development   • system development   • developmental process   • camera-type eye morphogenesis   • eye development   • animal organ development   • nervous system development   • retinal bipolar neuron differentiation   • glutamatergic neuron differentiation   • generation of neurons   • retina morphogenesis in camera-type eye   • anatomical structure morphogenesis   • sensory organ morphogenesis   • camera-type eye development   • cellular process   • cellular response to stimulus   • response to light stimulus   • response to stimulus   • cellular response to light stimulus   • response to radiation   • response to abiotic stimulus   • cellular response to radiation   • cellular response to abiotic stimulus   • cellular response to environmental stimulus   • regulation of cellular process   • signaling   • detection of abiotic stimulus   • cell communication   • signal transduction   • detection of light stimulus   • phototransduction   • detection of external stimulus   • regulation of biological process   • biological regulation   • detection of visible light   • response to external stimulus   • detection of stimulus   • G protein-coupled receptor signaling pathway   • G protein-coupled opsin signaling pathway   • phototransduction, visible light   • response to light intensity   • podosome assembly   • organelle assembly   • protein-containing complex organization   • membraneless organelle assembly   • cellular component organization   • cellular component biogenesis   • organelle organization   • cellular component assembly   • protein-containing complex assembly   • cellular component organization or biogenesis   • biosynthetic process   • metabolic process   • macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • multicellular organismal-level homeostasis   • homeostatic process   • anatomical structure homeostasis   • tissue homeostasis   • retina homeostasis   • photoreceptor cell maintenance   • absorption of visible light   • light absorption   • microtubule cytoskeleton organization   • microtubule-based process   • cytoskeleton organization   • sensory perception of light stimulus   • system process   • sensory perception   • nervous system process   • visual perception   • thermoception   • sensory perception of temperature stimulus   • detection of temperature stimulus involved in sensory perception   • response to temperature stimulus   • detection of temperature stimulus involved in thermoception   • detection of temperature stimulus   • detection of stimulus involved in sensory perception   • taxis   • thermotaxis   • locomotion   • cellular anatomical structure   • membrane   • cell-cell junction   • anchoring junction   • cell junction   • membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • cell-cell junction   • anchoring junction   • cell junction   • membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle   • organelle membrane   • cell periphery   • protein-containing complex   • plasma membrane protein complex   • plasma membrane   • plasma membrane signaling receptor complex   • G protein-coupled receptor complex   • membrane protein complex   • receptor complex   • sperm midpiece   • 9+2 motile cilium   • sperm flagellum   • motile cilium   • photoreceptor inner segment membrane   • plasma membrane region   • photoreceptor inner segment   • ciliary membrane   • photoreceptor outer segment membrane   • bounding membrane of organelle   • cell projection membrane   • Golgi membrane   • intracellular anatomical structure   • Golgi apparatus   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • cytoplasm   • outer membrane   • sperm head   • sperm head plasma membrane   • sperm plasma membrane   • rod photoreceptor outer segment
SCOP2Domain Identifier• G protein-coupled receptor-like
SCOP2Family Identifier• G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNAG
PDB ResiduesH:H:?1 H:H:?2 H:H:?5 H:H:?7 H:H:?8 H:H:?10 H:H:?11 H:H:?15 H:H:?16
Environment DetailsOpen EMBL-EBI Page
CodeNAG
NameN-Acetylglucosamine
SynonymsN-Acetyl-D-glucosamine
Identifier
FormulaC8 H15 N O6
Molecular Weight221.208
SMILES
PubChem24139
Formal Charge0
Total Atoms30
Total Chiral Atoms5
Total Bonds30
Total Aromatic Bonds0

CodeBMA
PDB ResiduesH:H:?3 H:H:?9 H:H:?12
Environment DetailsOpen EMBL-EBI Page
CodeBMA
Namebeta-D-mannopyranose
Synonymsbeta-D-mannose; D-mannose; mannose
Identifier
FormulaC6 H12 O6
Molecular Weight180.156
SMILES
PubChem439680
Formal Charge0
Total Atoms24
Total Chiral Atoms5
Total Bonds24
Total Aromatic Bonds0

CodeMAN
PDB ResiduesH:H:?4 H:H:?6 H:H:?13 H:H:?14
Environment DetailsOpen EMBL-EBI Page
CodeMAN
Namealpha-D-mannopyranose
Synonymsalpha-D-mannose; D-mannose; mannose
Identifier
FormulaC6 H12 O6
Molecular Weight180.156
SMILES
PubChem185698
Formal Charge0
Total Atoms24
Total Chiral Atoms5
Total Bonds24
Total Aromatic Bonds0

CodeRET
PDB ResiduesL:L:?1 M:M:?1
Environment DetailsOpen EMBL-EBI Page
CodeRET
NameRETINAL
Synonyms
Identifier
FormulaC20 H28 O
Molecular Weight284.436
SMILES
PubChem638015
Formal Charge0
Total Atoms49
Total Chiral Atoms0
Total Bonds49
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP02699
Sequence
>8FCZ_poly_Chain_R
MNGTEGPNF YVPFSNKTG VVRSPFEAP QYYLAEPWQ FSMLAAYMF 
LLIMLGFPI NFLTLYVTV QHKKLRTPL NYILLNLAV ADLFMVFGG 
FTTTLYTSL HGYFVFGPT GCNLEGFFA TLGGEIALW SLVVLAIER 
YVVVCKPMS NFRNHAIMG VAFTWVMAL ACAAPPLVG WSRYIPEGM 
QCSCGIDYY TPHEETNNE SFVIYMFVV HFIIPLIVI FFCYGQLVF 
TVATTQKAE KEVTRMVII MVIAFLICW LPYAGVAFY IFTHQGSDF 
GPIFMTIPA FFAKTSAVY NPVIYIMMN KQFRNCMVT TLCC


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8P15ASensoryOpsinRhodopsinBos taurus--Gi1/β1/γT15.92024-11-20To be published
8P15 (No Gprot) ASensoryOpsinRhodopsinBos taurus--5.92024-11-20To be published
8P13ASensoryOpsinRhodopsinBos taurus--Gi1/β1/γT15.22024-11-20To be published
8P13 (No Gprot) ASensoryOpsinRhodopsinBos taurus--5.22024-11-20To be published
8P12ASensoryOpsinsRhodopsinBos taurus--Gi1/β1/γT13.212024-11-20To be published
8P12 (No Gprot) ASensoryOpsinsRhodopsinBos taurus--3.212024-11-20To be published
9EPRASensoryOpsinsRhodopsinHasarius adansoniRetinal-Gi1/β1/γ24.92024-10-30doi.org/10.1038/s41467-024-53208-2
9EPR (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoniRetinal-4.92024-10-30doi.org/10.1038/s41467-024-53208-2
9EPQASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-chim(Gi1-CtGq)/β1/γ24.152024-10-2310.1038/s41467-024-53208-2
9EPQ (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-4.152024-10-2310.1038/s41467-024-53208-2
9EPPASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-chim(Gi1-CtGq)/β1/γ24.062024-10-2310.1038/s41467-024-53208-2
9EPP (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-4.062024-10-2310.1038/s41467-024-53208-2
8FD1ASensoryOpsinsRhodopsinBos taurus---4.252023-08-3010.1038/s41467-023-40911-9
8FD1 (Multimeric) ASensoryOpsinsRhodopsinBos taurus--4.252023-08-3010.1038/s41467-023-40911-9
8FD0ASensoryOpsinsRhodopsinBos taurus---3.712023-08-3010.1038/s41467-023-40911-9
8FD0 (Multimeric) ASensoryOpsinsRhodopsinBos taurus--3.712023-08-3010.1038/s41467-023-40911-9
8FCZASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.72023-08-3010.1038/s41467-023-40911-9
8FCZ (Multimeric) ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal-3.72023-08-3010.1038/s41467-023-40911-9
8A6EASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
8A6DASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
8A6CASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
7ZBEASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
7ZBCASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
7MTBASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK142021-07-0710.1038/s41586-021-03721-x
7MTB (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-42021-07-0710.1038/s41586-021-03721-x
7MTAASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK14.12021-07-0710.1038/s41586-021-03721-x
7MTA (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-4.12021-07-0710.1038/s41586-021-03721-x
7MT9ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK172021-07-0710.1038/s41586-021-03721-x
7MT9 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-72021-07-0710.1038/s41586-021-03721-x
7MT8ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK15.82021-07-0710.1038/s41586-021-03721-x
7MT8 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-5.82021-07-0710.1038/s41586-021-03721-x
6PH7ASensoryOpsinsRhodopsinBos taurus-NerolGt(CT)2.92020-07-01To be published
6PH7 (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Nerol2.92020-07-01To be published
6PGSASensoryOpsinsRhodopsinBos taurus-GeraniolGt(CT)2.92020-07-01To be published
6PGS (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Geraniol2.92020-07-01To be published
6PELASensoryOpsinsRhodopsinBos taurus-CitronellolGt(CT)3.192020-06-24To be published
6PEL (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Citronellol3.192020-06-24To be published
6NWEASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Gt(CT)2.712020-02-12To be published
6NWE (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-2.712020-02-12To be published
6OFJASensoryOpsinsRhodopsinBos taurus---4.52019-08-2110.1074/jbc.RA119.010089
6OFJ (Multimeric) ASensoryOpsinsRhodopsinBos taurus--4.52019-08-2110.1074/jbc.RA119.010089
6OYAASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt/β1/γ13.32019-07-2410.1016/j.molcel.2019.06.007
6OYA (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.32019-07-2410.1016/j.molcel.2019.06.007
6OY9ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt/β1/γ13.92019-07-2410.1016/j.molcel.2019.06.007
6OY9 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.92019-07-2410.1016/j.molcel.2019.06.007
6QNOASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gi1/β1/γ14.382019-07-1010.7554/eLife.46041
6QNO (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-4.382019-07-1010.7554/eLife.46041
6I9KASensoryOpsinsRhodopsinHasarius adansoni9-cis-Retinal--2.152019-07-0310.1073/pnas.1902192116
6FUFASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Go3.122018-10-0310.1126/sciadv.aat7052
6FUF (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.122018-10-0310.1126/sciadv.aat7052
6CMOASensoryOpsinsRhodopsinHomo sapiens--Gi1/β1/γ24.52018-06-2010.1038/s41586-018-0215-y
6CMO (No Gprot) ASensoryOpsinsRhodopsinHomo sapiens--4.52018-06-2010.1038/s41586-018-0215-y
6FKDASensoryOpsinsRhodopsinBos taurus-PubChem 137349183-2.492018-04-0410.1073/pnas.1718084115
6FKCASensoryOpsinsRhodopsinBos taurus-PubChem 132473039-2.462018-04-0410.1073/pnas.1718084115
6FKBASensoryOpsinsRhodopsinBos taurus-PubChem 132473038-3.032018-04-0410.1073/pnas.1718084115
6FKAASensoryOpsinsRhodopsinBos taurus-PubChem 132473037-2.72018-04-0410.1073/pnas.1718084115
6FK9ASensoryOpsinsRhodopsinBos taurus-PubChem 132473036-2.632018-04-0410.1073/pnas.1718084115
6FK8ASensoryOpsinsRhodopsinBos taurus-PubChem 132473035-2.872018-04-0410.1073/pnas.1718084115
6FK7ASensoryOpsinsRhodopsinBos taurus-PubChem 132473034-2.622018-04-0410.1073/pnas.1718084115
6FK6ASensoryOpsinsRhodopsinBos taurus-PubChem 132473033-2.362018-04-0410.1073/pnas.1718084115
5WKTASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Gt(CT)3.22017-12-1310.1038/nprot.2017.135
5WKT (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-3.22017-12-1310.1038/nprot.2017.135
5W0PASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.012017-08-0910.1016/j.cell.2017.07.002
5TE5ASensoryOpsinsRhodopsinBos taurus20-Methanoretinal--4.012017-03-1510.1073/pnas.1617446114
5TE3ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside--2.72017-03-1510.1073/pnas.1617446114
5DYSASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.32016-08-1010.15252/embr.201642671
5EN0ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)2.812016-08-1010.15252/embr.201642671
5EN0 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-2.812016-08-1010.15252/embr.201642671
5DGYASensoryOpsinsRhodopsinHomo sapiens--Arrestin17.72016-03-2310.1038/sdata.2016.21
4X1HASensoryOpsinsRhodopsinBos taurusNonyl-β-D-Glucopyranoside-Gt(CT)2.292015-11-0410.1016/j.str.2015.09.015
4X1H (No Gprot) ASensoryOpsinsRhodopsinBos taurusNonyl-β-D-Glucopyranoside-2.292015-11-0410.1016/j.str.2015.09.015
4ZWJASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.32015-07-2910.1038/nature14656
4WW3ASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-Retinal--2.82015-06-1710.1371/journal.pone.0126970
4PXFASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Arrestin1 Finger Loop2.752014-09-1710.1038/ncomms5801
4J4QASensoryOpsinsRhodopsinBos taurusOctyl β-D-Glucopyranoside-Gt(CT)2.652013-10-3010.1002/anie.201302374
4J4Q (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl β-D-Glucopyranoside-2.652013-10-3010.1002/anie.201302374
4BEYASensoryOpsinsRhodopsinBos taurus--Gt(CT)2.92013-05-0810.1038/embor.2013.44
4BEY (No Gprot) ASensoryOpsinsRhodopsinBos taurus--2.92013-05-0810.1038/embor.2013.44
4BEZASensoryOpsinsRhodopsinBos taurus---3.32013-04-2410.1038/embor.2013.44
4A4MASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)3.32012-01-2510.1073/pnas.1114089108
4A4M (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.32012-01-2510.1073/pnas.1114089108
3AYNASensoryOpsinsRhodopsinTodarodes pacificus9-cis-Retinal--2.72011-08-1710.1016/j.jmb.2011.08.044
3AYMASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-Retinal--2.82011-08-1710.1016/j.jmb.2011.08.044
2X72ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)32011-03-1610.1038/nature09795
2X72 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-32011-03-1610.1038/nature09795
3PXOASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--32011-03-0910.1038/nature09789
3PQRASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)2.852011-03-0910.1038/nature09789
3PQR (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-2.852011-03-0910.1038/nature09789
3OAXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62011-01-1910.1016/j.bpj.2010.08.003
3DQBASensoryOpsinsRhodopsinBos taurus--Gt(CT)3.22008-09-2310.1038/nature07330
3DQB (No Gprot) ASensoryOpsinsRhodopsinBos taurus--3.22008-09-2310.1038/nature07330
3C9MASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42008-08-0510.1107/S0907444908017162
3C9LASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652008-08-0510.1107/S0907444908017162
3CAPASensoryOpsinsRhodopsinBos taurus---2.92008-06-2410.1038/nature07063
3CAP (Multimeric) ASensoryOpsinsRhodopsinBos taurus--2.92008-06-2410.1038/nature07063
2Z73ASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--2.52008-05-1310.1038/nature06925
2ZIYASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--3.72008-05-0610.1074/jbc.C800040200
2PEDASensoryOpsinsRhodopsinBos taurus9-cis-Retinal--2.952007-10-3010.1529/biophysj.107.108225
2J4YASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42007-09-2510.1016/j.jmb.2007.03.007
2I37ASensoryOpsinsRhodopsinBos taurus---4.152006-10-1710.1073/pnas.0608022103
2I36ASensoryOpsinsRhodopsinBos taurus---4.12006-10-1710.1073/pnas.0608022103
2I35ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.82006-10-1710.1073/pnas.0608022103
2G87ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.62006-09-0210.1002/anie.200600595
2HPYASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.82006-08-2210.1073/pnas.0601765103
1U19ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.22004-10-1210.1016/j.jmb.2004.07.044
1GZMASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652003-11-2010.1016/j.jmb.2004.08.090
1L9HASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62002-05-1510.1073/pnas.082666399
1HZXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82001-07-0410.1021/bi0155091
1F88ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82000-08-0410.1126/science.289.5480.739




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