Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:L38 4.265447
2R:R:M52 4.0475409
3R:R:W60 4.4508
4R:R:L64 6.0175419
5R:R:D68 8.5875419
6R:R:W88 7.5775409
7R:R:T114 4.8125418
8R:R:R134 8.482559
9R:R:Y160 3.35408
10R:R:R161 8.092528
11R:R:C172 4.44428
12R:R:F345 8.8425420
13R:R:P348 4.055400
14R:R:M352 5.565410
15R:R:Y356 4.095610
16R:R:V382 3.67418
17R:R:F386 6.315419
18R:R:W390 7.59719
19R:R:T391 4.4325406
20R:R:Y393 8.94429
21R:R:T407 1.9825407
22R:R:W416 4.5325407
23R:R:N431 8.855419
24R:R:Y435 6.29333619
25R:R:F442 4.196509
26L:L:?1 9.716151320
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:E20 R:R:V23 30.84035.7NoNo044
2R:R:L82 R:R:V23 32.27724.47NoNo074
3R:R:E20 R:R:P22 27.82439.43NoNo344
4R:R:P22 R:R:W416 26.48394.05NoYes047
5R:R:L30 R:R:S78 10.34783NoNo068
6R:R:C72 R:R:S428 11.05363.44NoNo089
7R:R:D68 R:R:S428 19.08617.36YesNo099
8R:R:D68 R:R:N431 31.459810.77YesYes199
9R:R:N427 R:R:N431 70.87089.54NoYes199
10R:R:N427 R:R:W390 69.829913.56NoYes199
11R:R:M106 R:R:W390 1006.98NoYes099
12R:R:I102 R:R:M106 98.85254.37NoNo089
13L:L:?1 R:R:I102 96.97893.93YesNo008
14L:L:?1 R:R:H418 42.60474.42YesNo004
15R:R:H418 R:R:L82 41.55883.86NoNo047
16R:R:D68 R:R:N41 36.82668.08YesNo099
17R:R:N41 R:R:P432 31.068813.03NoNo099
18R:R:F433 R:R:P432 30.07362.89NoNo069
19R:R:F433 R:R:L437 29.06833.65NoNo067
20R:R:L437 R:R:V44 28.04272.98NoNo079
21R:R:F442 R:R:V44 24.89976.55YesNo099
22R:R:F442 R:R:M52 12.02846.22YesYes099
23R:R:F386 R:R:W390 29.31215.03YesYes199
24R:R:F386 R:R:M352 28.33214.98YesYes190
25R:R:M352 R:R:Y356 31.90663.59YesYes100
26R:R:Y356 R:R:Y435 36.88252.98YesYes109
27R:R:I116 R:R:Y435 79.13183.63NoYes199
28R:R:I116 R:R:W60 77.59848.22NoYes098
29R:R:C143 R:R:W60 17.09573.92NoYes088
30R:R:C143 R:R:H63 15.257714.74NoNo088
31R:R:L64 R:R:N431 20.01526.87YesYes199
32R:R:L64 R:R:Y435 39.02013.52YesYes199
33R:R:L113 R:R:N431 20.27428.24NoYes189
34R:R:L113 R:R:Y435 19.857816.41NoYes189
35R:R:V56 R:R:W60 57.52732.45NoYes088
36R:R:R134 R:R:V56 53.830915.69YesNo098
37L:L:?1 R:R:H81 15.536920.33YesNo007
38R:R:H81 R:R:W88 12.76979.52NoYes079
39L:L:?1 R:R:I98 15.09525.89YesNo008
40R:R:I98 R:R:W88 12.50063.52NoYes089
41R:R:W88 R:R:Y90 16.06511.58YesNo097
42L:L:?1 R:R:V103 11.13993.07YesNo005
43R:R:F107 R:R:R340 12.15037.48NoNo080
44R:R:R340 R:R:Y393 13.19624.12NoYes009
45L:L:?1 R:R:Y393 16.166522.57YesYes209
46R:R:V110 R:R:W390 10.85558.58NoYes199
47R:R:P348 R:R:V110 10.26153.53YesNo009
48R:R:R134 R:R:V123 38.4263.92YesNo595
49R:R:C130 R:R:V123 36.7865.12NoNo075
50R:R:F125 R:R:F358 13.15567.5NoNo060
51R:R:F125 R:R:K126 15.35922.48NoNo066
52R:R:I128 R:R:K126 17.54765.82NoNo076
53R:R:I128 R:R:N132 21.89392.83NoNo078
54R:R:H133 R:R:N132 26.19953.83NoNo088
55R:R:H133 R:R:W129 28.337123.27NoNo086
56R:R:C130 R:R:W129 30.46462.61NoNo076
57R:R:M138 R:R:R134 10.82512.48NoYes069
58L:L:?1 R:R:Y174 10.77438.87YesNo207
59R:R:G344 R:R:P348 13.96294.06NoYes000
60R:R:G344 R:R:V343 12.41941.84NoNo000
61R:R:H394 R:R:Y393 10.93175.44NoYes299
62R:R:F345 R:R:T391 11.37346.49YesYes006
63R:R:L387 R:R:T391 12.77482.95NoYes066
64R:R:L387 R:R:V383 12.99312.98NoNo068
65R:R:F396 R:R:W416 22.35093.01NoYes047
66R:R:F396 R:R:L413 19.6046.09NoNo047
67R:R:L413 R:R:T403 18.0354.42NoNo072
68L:L:?1 R:R:S78 11.403912.39YesNo008
69R:R:D68 R:R:L64 19.69038.14YesYes199
70R:R:V383 R:R:Y356 13.1153.79NoYes080
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:L30 R:R:S78 3 0 No No 6 8 2 1
R:R:I102 R:R:S74 6.19 0 No No 8 9 1 2
L:L:?1 R:R:S78 12.39 2 Yes No 0 8 0 1
R:R:G86 R:R:H81 3.18 0 No No 7 7 2 1
R:R:H81 R:R:W88 9.52 0 No Yes 7 9 1 2
L:L:?1 R:R:H81 20.33 2 Yes No 0 7 0 1
R:R:H418 R:R:L82 3.86 0 No No 4 7 1 2
R:R:I98 R:R:W88 3.52 0 No Yes 8 9 1 2
R:R:C172 R:R:C95 7.28 2 Yes No 8 9 1 2
R:R:I98 R:R:P99 3.39 0 No No 8 8 1 2
L:L:?1 R:R:I98 5.89 2 Yes No 0 8 0 1
R:R:P99 R:R:R161 11.53 0 No Yes 8 8 2 1
R:R:I102 R:R:M106 4.37 0 No No 8 9 1 2
L:L:?1 R:R:I102 3.93 2 Yes No 0 8 0 1
R:R:V103 R:R:V157 6.41 0 No No 5 9 1 2
L:L:?1 R:R:V103 3.07 2 Yes No 0 5 0 1
R:R:C172 R:R:R161 5.57 2 Yes Yes 8 8 1 1
R:R:G173 R:R:R161 6 0 No Yes 1 8 2 1
R:R:R161 R:R:Y174 12.35 2 Yes No 8 7 1 1
L:L:?1 R:R:R161 5.01 2 Yes Yes 0 8 0 1
L:L:?1 R:R:C172 3.27 2 Yes Yes 0 8 0 1
L:L:?1 R:R:Y174 8.87 2 Yes No 0 7 0 1
R:R:R340 R:R:Y393 4.12 0 No Yes 0 9 2 1
R:R:H394 R:R:Y393 5.44 2 No Yes 9 9 2 1
R:R:I421 R:R:Y393 3.63 2 No Yes 4 9 1 1
L:L:?1 R:R:Y393 22.57 2 Yes Yes 0 9 0 1
L:L:?1 R:R:G397 5.88 2 Yes No 0 8 0 1
R:R:D417 R:R:I421 4.2 2 No No 8 4 1 1
L:L:?1 R:R:D417 14 2 Yes No 0 8 0 1
L:L:?1 R:R:H418 4.42 2 Yes No 0 4 0 1
L:L:?1 R:R:I421 16.68 2 Yes No 0 4 0 1
R:R:Y160 R:R:Y174 1.99 0 Yes No 8 7 2 1
R:R:C172 R:R:I163 1.64 2 Yes No 8 6 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8ZWF_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.89
Number of Linked Nodes 241
Number of Links 262
Number of Hubs 26
Number of Links mediated by Hubs 106
Number of Communities 5
Number of Nodes involved in Communities 36
Number of Links involved in Communities 49
Path Summary
Number Of Nodes in MetaPath 71
Number Of Links MetaPath 70
Number of Shortest Paths 38059
Length Of Smallest Path 3
Average Path Length 14.5509
Length of Longest Path 36
Minimum Path Strength 1.47
Average Path Strength 6.14419
Maximum Path Strength 17.4733
Minimum Path Correlation 0.7
Average Path Correlation 0.916477
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.44828
Average % Of Corr. Nodes 38.3669
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 35.0827
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code_L_
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code_L_
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ16581
Sequence
>8ZWF_nogp_Chain_R
NEPPVILSM VILSLTFLL GLPGNGLVL WVAGLKMQR TVNTIWFLH 
LTLADLLCC LSLPFSLAH LALQGQWPY GRFLCKLIP SIIVLNMFA 
SVFLLTAIS LDRCLVVFK PIWCQNHRN VGMACSICG CIWVVAFVM 
CIPVFVYRE INRCGYKSK TFRVAVVVV AVFLVCWTP YHIFGVLSL 
LTDPETPLG KTLMSWDHV CIALASANS CFNPFLYAL LGKDFRKKA 
RQSI


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8HK2APeptideComplement PeptideC3aBHomo sapiensC3a-Gi1/β1/γ22.92023-05-10doi.org/10.1038/s41589-023-01339-w
8HK2 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a-2.92023-05-10doi.org/10.1038/s41589-023-01339-w
8HK3APeptideComplement PeptideC3aBHomo sapiens--Gi1/β1/γ23.22023-05-10doi.org/10.1038/s41589-023-01339-w
8HK3 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.22023-05-10doi.org/10.1038/s41589-023-01339-w
8IA8APeptideComplement PeptideC3aBHomo sapiensE7 peptide-Gi1/β1/γ22.862023-05-24To be published
8IA8 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensE7 peptide-2.862023-05-24To be published
8I95APeptideComplement PeptideC3aBHomo sapiensEP54-Go/β1/γ22.882023-10-18doi.org/10.1016/j.cell.2023.09.020
8I95 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-2.882023-10-18doi.org/10.1016/j.cell.2023.09.020
8I97APeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8I97 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9AAPeptideComplement PeptideC3aBHomo sapiensEP54-chim(NtGi1-Gs-CtGq)/β1/γ23.572023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9A (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-3.572023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9LAPeptideComplement PeptideC3aBHomo sapiensC3a-Go/β1/γ23.182023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9L (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a-3.182023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9SAPeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.262023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9S (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.262023-10-18doi.org/10.1016/j.cell.2023.09.020
8J6DAPeptideComplement PeptideC3aBHomo sapiensEP141-Go/β1/γ23.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8J6D (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP141-3.12023-10-18doi.org/10.1016/j.cell.2023.09.020
9KVPAPeptideComplement PeptideC3aBHomo sapiensSB290157-Go/β1/γ22.792025-11-2610.1101/2025.05.26.656101
9KVP (No Gprot) APeptideComplement PeptideC3aBHomo sapiensSB290157-2.792025-11-2610.1101/2025.05.26.656101
9KZ2APeptideComplement PeptideC3aBHomo sapiensEP67-Go/β1/γ23.432025-11-2610.1101/2025.05.26.656101
9KZ2 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP67-3.432025-11-2610.1101/2025.05.26.656101
9KZ8APeptideComplement PeptideC3aBMus musculusEP67-Go/β1/γ23.32025-11-2610.1101/2025.05.26.656101
9KZ8 (No Gprot) APeptideComplement PeptideC3aBMus musculusEP67-3.32025-11-2610.1101/2025.05.26.656101
9KZKAPeptideComplement PeptideC3aBMus musculusC3a (fragment)-Go/β1/γ23.542025-11-2610.1101/2025.05.26.656101
9KZK (No Gprot) APeptideComplement PeptideC3aBMus musculusC3a (fragment)-3.542025-11-2610.1101/2025.05.26.656101
9L0HAPeptideComplement PeptideC3aBMus musculusJR14a-Go/β1/γ23.572025-11-2610.1101/2025.05.26.656101
9L0H (No Gprot) APeptideComplement PeptideC3aBMus musculusJR14a-3.572025-11-2610.1101/2025.05.26.656101
9UMJAPeptideComplement PeptideC3aBMus musculusEP54-Go/β1/γ23.382025-11-2610.1101/2025.05.26.656101
9UMJ (No Gprot) APeptideComplement PeptideC3aBMus musculusEP54-3.382025-11-2610.1101/2025.05.26.656101
9IPVAPeptideComplement PeptideC3aBHomo sapiensJR14a-Gi1/β1/γ22.532025-04-23doi.org/10.1038/s44318-025-00429-w
9IPV (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-2.532025-04-23doi.org/10.1038/s44318-025-00429-w
9IPYAPeptideComplement PeptideC3aBHomo sapiensJR14a--3.552025-04-23doi.org/10.1038/s44318-025-00429-w
9ISIAPeptideComplement PeptideC3aBHomo sapiens---3.562025-04-23doi.org/10.1038/s44318-025-00429-w
8ZWFAPeptideComplement PeptideC3aBHomo sapiensJR14a--32025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWF (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-32025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWGAPeptideComplement PeptideC3aBHomo sapiensJR14a-Gi1/β1/γ22.872025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWG (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-2.872025-05-14doi.org/10.1038/s41421-024-00765-x
9KUTAPeptideComplement PeptideC3aBHomo sapiensJR14a-Go/β1/γ23.292025-11-2610.1101/2025.05.26.656101
9KUT (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-3.292025-11-2610.1101/2025.05.26.656101
9KV6APeptideComplement PeptideC3aBMus musculusTLQP21-Go/β1/γ22.882025-11-2610.1101/2025.05.26.656101
9KV6 (No Gprot) APeptideComplement PeptideC3aBMus musculusTLQP21-2.882025-11-2610.1101/2025.05.26.656101
9KV8APeptideComplement PeptideC3aBMus musculusTLQP21-Go/β1/γ23.172025-11-2610.1101/2025.05.26.656101
9KV8 (No Gprot) APeptideComplement PeptideC3aBMus musculusTLQP21-3.172025-11-2610.1101/2025.05.26.656101




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8ZWF_nogp.zip



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