Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:K4 4.5025410
2L:L:?8 10.2825400
3L:L:?9 9.5925410
4L:L:R10 6.41333610
5R:R:N41 5.12509
6R:R:W60 6.08833608
7R:R:H63 5.548568
8R:R:L64 4.605429
9R:R:D68 6.108529
10R:R:F69 3.48407
11R:R:L75 5.2275438
12R:R:Y90 6.2125408
13R:R:I103 4.165415
14R:R:F107 6.2675418
15R:R:F111 2.6575408
16R:R:R134 7.772559
17R:R:W147 4.2075409
18R:R:R161 7.57408
19R:R:F164 5.4225482
20R:R:Y174 8.795408
21R:R:F176 8.15405
22R:R:R333 4.51667619
23R:R:F342 6.67403
24R:R:Y349 5.97528
25R:R:F379 7.3775409
26R:R:W383 7.556519
27R:R:Y386 5.44571718
28R:R:W409 5.2575405
29R:R:D410 6.49419
30R:R:H411 5.516514
31R:R:N424 9.5275429
32R:R:Y428 5.64333629
33R:R:F435 3.616549
34R:R:K438 13.2875447
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:H81 R:R:L82 10.60236.43NoNo087
2R:R:H411 R:R:L82 11.73436.43YesNo047
3R:R:D23 R:R:H411 14.238910.08NoYes144
4L:L:K4 R:R:H411 38.62432.62YesYes104
5L:L:K4 R:R:D410 44.45814.15YesYes109
6R:R:F176 R:R:R173 32.41655.34YesNo051
7R:R:F176 R:R:Y174 47.48516.19YesYes058
8L:L:?8 L:L:?9 15.237721.14YesYes000
9L:L:R10 R:R:D410 54.17449.53YesYes109
10L:L:R10 R:R:Y386 44.898611.32YesYes108
11L:L:R10 R:R:R333 10.49994.26YesYes109
12R:R:D23 R:R:Q20 12.73829.14NoNo144
13R:R:H411 R:R:S26 15.82162.79YesNo048
14R:R:A415 R:R:S26 14.2853.42NoNo098
15R:R:A415 R:R:L30 11.18114.73NoNo096
16R:R:W383 R:R:Y386 1005.79YesYes198
17R:R:N420 R:R:W383 67.148112.43NoYes099
18R:R:N420 R:R:N424 64.812512.26NoYes099
19R:R:D68 R:R:N424 25.327812.12YesYes299
20R:R:D68 R:R:N41 41.66154.04YesYes099
21R:R:C72 R:R:N41 10.01333.15NoYes089
22R:R:N41 R:R:T65 25.88615.85YesNo099
23R:R:T65 R:R:V44 23.28426.35NoNo099
24R:R:A429 R:R:V44 21.98325.09NoNo099
25R:R:A429 R:R:F435 20.64642.77NoYes099
26R:R:F379 R:R:W383 43.36211.02YesYes099
27R:R:F379 R:R:M345 57.49336.22YesNo097
28R:R:M345 R:R:Y349 32.07333.59NoYes278
29R:R:R120 R:R:Y349 38.75748.23NoYes298
30R:R:I116 R:R:R120 31.35125.01NoNo299
31R:R:I116 R:R:W60 71.79374.7NoYes098
32R:R:D119 R:R:W60 35.914815.63NoYes098
33R:R:D119 R:R:R134 31.289711.91NoYes599
34R:R:L64 R:R:N424 20.0014.12YesYes299
35R:R:L64 R:R:Y428 38.48084.69YesYes299
36R:R:I116 R:R:Y428 42.61426.04NoYes299
37R:R:L113 R:R:N424 20.20089.61NoYes299
38R:R:L113 R:R:Y428 19.73989.38NoYes299
39R:R:V59 R:R:W60 26.92584.9NoYes078
40R:R:H63 R:R:V59 19.6224.15YesNo687
41R:R:F164 R:R:N175 23.68376.04YesNo025
42R:R:D162 R:R:N175 21.74765.39NoNo065
43R:R:D162 R:R:L92 19.80136.79NoNo062
44R:R:L163 R:R:L92 17.84471.38NoNo062
45R:R:C172 R:R:L163 13.90081.59NoNo096
46R:R:F107 R:R:R333 15.34527.48YesYes189
47R:R:F107 R:R:V110 19.89862.62YesNo089
48R:R:M345 R:R:S117 25.14347.67NoNo279
49R:R:C348 R:R:S117 40.85235.16NoNo089
50R:R:C348 R:R:L118 16.12893.17NoNo088
51R:R:I344 R:R:L118 14.56164.28NoNo068
52R:R:I344 R:R:T114 12.9844.56NoNo068
53R:R:P341 R:R:T114 11.39623.5NoNo098
54R:R:C121 R:R:C348 24.96415.46NoNo088
55R:R:C121 R:R:I352 15.94453.27NoNo089
56R:R:C130 R:R:R134 19.7045.57NoYes089
57R:R:C130 R:R:L122 17.27624.76NoNo087
58R:R:K126 R:R:L122 14.83812.82NoNo067
59R:R:I329 R:R:Y174 50.45583.63NoYes068
60R:R:D410 R:R:V389 10.93535.84YesNo094
61R:R:F342 R:R:F379 10.05949.65YesYes039
62R:R:I352 R:R:M356 12.79452.92NoNo097
63R:R:C382 R:R:N420 10.24897.87NoNo099
64R:R:I329 R:R:R333 55.05023.76NoYes069
65R:R:F164 R:R:R173 25.010210.69YesNo821
66R:R:R333 R:R:Y386 41.57454.12YesYes198
67L:L:?9 R:R:Y386 13.0663.58YesYes108
68R:R:F379 R:R:V110 21.96272.62YesNo099
69R:R:D68 R:R:L64 19.1614.07YesYes299
70R:R:S117 R:R:Y349 17.08678.9NoYes298
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:F3 R:R:D23 8.36 1 No No 0 4 0 1
L:L:F3 R:R:H411 5.66 1 No Yes 0 4 0 1
L:L:K4 R:R:D410 4.15 1 Yes Yes 0 9 0 1
L:L:M6 R:R:R161 3.72 0 No Yes 0 8 0 1
L:L:P7 R:R:D410 6.44 1 No Yes 0 9 0 1
L:L:?8 R:R:S78 6.63 0 Yes No 0 8 0 1
L:L:?8 R:R:P99 5.8 0 Yes No 0 8 0 1
L:L:?8 R:R:I102 7.56 0 Yes No 0 8 0 1
L:L:?9 R:R:Y386 3.58 1 Yes Yes 0 8 0 1
L:L:?9 R:R:I414 8.71 1 Yes No 0 5 0 1
L:L:R10 R:R:R333 4.26 1 Yes Yes 0 9 0 1
L:L:R10 R:R:Y386 11.32 1 Yes Yes 0 8 0 1
L:L:R10 R:R:G390 6 1 Yes No 0 8 0 1
L:L:R10 R:R:D410 9.53 1 Yes Yes 0 9 0 1
R:R:D23 R:R:Q20 9.14 1 No No 4 4 1 2
R:R:D23 R:R:H411 10.08 1 No Yes 4 4 1 1
R:R:I102 R:R:S74 4.64 0 No No 8 9 1 2
R:R:H81 R:R:L82 6.43 0 No No 8 7 1 2
R:R:G86 R:R:H81 7.94 0 No No 8 8 2 1
R:R:H411 R:R:L82 6.43 1 Yes No 4 7 1 2
R:R:I98 R:R:P99 3.39 0 No No 8 8 2 1
R:R:P99 R:R:R161 7.21 0 No Yes 8 8 1 1
R:R:F107 R:R:I103 5.02 1 Yes Yes 8 5 2 2
R:R:I103 R:R:V157 4.61 1 Yes No 5 8 2 2
R:R:I103 R:R:R333 3.76 1 Yes Yes 5 9 2 1
R:R:F107 R:R:M153 9.95 1 Yes No 8 8 2 2
R:R:F107 R:R:R333 7.48 1 Yes Yes 8 9 2 1
R:R:M153 R:R:R333 3.72 1 No Yes 8 9 2 1
R:R:R161 R:R:V157 3.92 0 Yes No 8 8 1 2
R:R:R161 R:R:Y174 15.43 0 Yes Yes 8 8 1 2
R:R:I329 R:R:Y174 3.63 0 No Yes 6 8 2 2
R:R:I329 R:R:R333 3.76 0 No Yes 6 9 2 1
R:R:R333 R:R:Y386 4.12 1 Yes Yes 9 8 1 1
R:R:W383 R:R:Y386 5.79 1 Yes Yes 9 8 2 1
R:R:A417 R:R:W383 3.89 1 No Yes 9 9 2 2
R:R:H387 R:R:Y386 3.27 0 No Yes 9 8 2 1
R:R:I414 R:R:Y386 6.04 1 No Yes 5 8 1 1
R:R:A417 R:R:Y386 4 1 No Yes 9 8 2 1
R:R:D410 R:R:V389 5.84 1 Yes No 9 4 1 2
R:R:M407 R:R:P398 3.35 0 No No 1 3 1 2
L:L:K4 R:R:M407 2.88 1 Yes No 0 1 0 1
R:R:H411 R:R:S26 2.79 1 Yes No 4 8 1 2
L:L:K4 R:R:H411 2.62 1 Yes Yes 0 4 0 1
L:L:D5 R:R:H81 2.52 0 No No 0 8 0 1
L:L:R10 R:R:L393 2.43 1 Yes No 0 1 0 1
L:L:D5 R:R:I171 1.4 0 No No 0 1 0 1
R:R:D167 R:R:I171 1.4 0 No No 3 1 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9KZ8_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.09
Number of Linked Nodes 268
Number of Links 291
Number of Hubs 34
Number of Links mediated by Hubs 130
Number of Communities 8
Number of Nodes involved in Communities 48
Number of Links involved in Communities 61
Path Summary
Number Of Nodes in MetaPath 71
Number Of Links MetaPath 70
Number of Shortest Paths 41899
Length Of Smallest Path 3
Average Path Length 13.1807
Length of Longest Path 30
Minimum Path Strength 1.21
Average Path Strength 6.18811
Maximum Path Strength 18.35
Minimum Path Correlation 0.7
Average Path Correlation 0.918936
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 45.6899
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.0469
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeMLE
PDB ResiduesL:L:?8
Environment DetailsOpen EMBL-EBI Page
CodeMLE
NameN-METHYLLEUCINE
Synonyms
Identifier
FormulaC7 H15 N O2
Molecular Weight145.199
SMILES
PubChem2777993
Formal Charge0
Total Atoms25
Total Chiral Atoms1
Total Bonds24
Total Aromatic Bonds0

CodeDAL
PDB ResiduesL:L:?9
Environment DetailsOpen EMBL-EBI Page
CodeDAL
NameD-Alanine
SynonymsD-Alanine
Identifier
FormulaC3 H7 N O2
Molecular Weight89.093
SMILES
PubChem71080
Formal Charge0
Total Atoms13
Total Chiral Atoms1
Total Bonds12
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtO09047
Sequence
>9KZ8_nogp_Chain_R
PLFQPQDIA SMVILGLTC LLGLLGNGL VLWVAGVKM KTTVNTVWF 
LHLTLADFL CCLSLPFSL AHLILQGHW PYGLFLCKL IPSIIILNM 
FASVFLLTA ISLDRCLIV HKPIWCQNH RNVRTAFAI CGCVWVVAF 
VMCVPVFVY RDLFIMDIC RYNFDVPTP LMAITITRL VVGFLVPFF 
IMVICYSLI VFRMRKTNF TKSRNKTFR VAVAVVTVF FICWTPYHL 
VGVLLLITD PESSLGEAV MSWDHMSIA LASANSCFN PFLYALLGK 
DFRKKARQS I


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8HK2APeptideComplement PeptideC3aBHomo sapiensC3a-Gi1/β1/γ22.92023-05-10doi.org/10.1038/s41589-023-01339-w
8HK2 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a-2.92023-05-10doi.org/10.1038/s41589-023-01339-w
8HK3APeptideComplement PeptideC3aBHomo sapiens--Gi1/β1/γ23.22023-05-10doi.org/10.1038/s41589-023-01339-w
8HK3 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.22023-05-10doi.org/10.1038/s41589-023-01339-w
8IA8APeptideComplement PeptideC3aBHomo sapiensE7 peptide-Gi1/β1/γ22.862023-05-24To be published
8IA8 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensE7 peptide-2.862023-05-24To be published
8I95APeptideComplement PeptideC3aBHomo sapiensEP54-Go/β1/γ22.882023-10-18doi.org/10.1016/j.cell.2023.09.020
8I95 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-2.882023-10-18doi.org/10.1016/j.cell.2023.09.020
8I97APeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8I97 (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9AAPeptideComplement PeptideC3aBHomo sapiensEP54-chim(NtGi1-Gs-CtGq)/β1/γ23.572023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9A (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP54-3.572023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9LAPeptideComplement PeptideC3aBHomo sapiensC3a-Go/β1/γ23.182023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9L (No Gprot) APeptideComplement PeptideC3aBHomo sapiensC3a-3.182023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9SAPeptideComplement PeptideC3aBHomo sapiens--Go/β1/γ23.262023-10-18doi.org/10.1016/j.cell.2023.09.020
8I9S (No Gprot) APeptideComplement PeptideC3aBHomo sapiens--3.262023-10-18doi.org/10.1016/j.cell.2023.09.020
8J6DAPeptideComplement PeptideC3aBHomo sapiensEP141-Go/β1/γ23.12023-10-18doi.org/10.1016/j.cell.2023.09.020
8J6D (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP141-3.12023-10-18doi.org/10.1016/j.cell.2023.09.020
9KVPAPeptideComplement PeptideC3aBHomo sapiensSB290157-Go/β1/γ22.792025-11-2610.1101/2025.05.26.656101
9KVP (No Gprot) APeptideComplement PeptideC3aBHomo sapiensSB290157-2.792025-11-2610.1101/2025.05.26.656101
9KZ2APeptideComplement PeptideC3aBHomo sapiensEP67-Go/β1/γ23.432025-11-2610.1101/2025.05.26.656101
9KZ2 (No Gprot) APeptideComplement PeptideC3aBHomo sapiensEP67-3.432025-11-2610.1101/2025.05.26.656101
9KZ8APeptideComplement PeptideC3aBMus musculusEP67-Go/β1/γ23.32025-11-2610.1101/2025.05.26.656101
9KZ8 (No Gprot) APeptideComplement PeptideC3aBMus musculusEP67-3.32025-11-2610.1101/2025.05.26.656101
9KZKAPeptideComplement PeptideC3aBMus musculusC3a (fragment)-Go/β1/γ23.542025-11-2610.1101/2025.05.26.656101
9KZK (No Gprot) APeptideComplement PeptideC3aBMus musculusC3a (fragment)-3.542025-11-2610.1101/2025.05.26.656101
9L0HAPeptideComplement PeptideC3aBMus musculusJR14a-Go/β1/γ23.572025-11-2610.1101/2025.05.26.656101
9L0H (No Gprot) APeptideComplement PeptideC3aBMus musculusJR14a-3.572025-11-2610.1101/2025.05.26.656101
9UMJAPeptideComplement PeptideC3aBMus musculusEP54-Go/β1/γ23.382025-11-2610.1101/2025.05.26.656101
9UMJ (No Gprot) APeptideComplement PeptideC3aBMus musculusEP54-3.382025-11-2610.1101/2025.05.26.656101
9IPVAPeptideComplement PeptideC3aBHomo sapiensJR14a-Gi1/β1/γ22.532025-04-23doi.org/10.1038/s44318-025-00429-w
9IPV (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-2.532025-04-23doi.org/10.1038/s44318-025-00429-w
9IPYAPeptideComplement PeptideC3aBHomo sapiensJR14a--3.552025-04-23doi.org/10.1038/s44318-025-00429-w
9ISIAPeptideComplement PeptideC3aBHomo sapiens---3.562025-04-23doi.org/10.1038/s44318-025-00429-w
8ZWFAPeptideComplement PeptideC3aBHomo sapiensJR14a--32025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWF (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-32025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWGAPeptideComplement PeptideC3aBHomo sapiensJR14a-Gi1/β1/γ22.872025-05-14doi.org/10.1038/s41421-024-00765-x
8ZWG (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-2.872025-05-14doi.org/10.1038/s41421-024-00765-x
9KUTAPeptideComplement PeptideC3aBHomo sapiensJR14a-Go/β1/γ23.292025-11-2610.1101/2025.05.26.656101
9KUT (No Gprot) APeptideComplement PeptideC3aBHomo sapiensJR14a-3.292025-11-2610.1101/2025.05.26.656101
9KV6APeptideComplement PeptideC3aBMus musculusTLQP21-Go/β1/γ22.882025-11-2610.1101/2025.05.26.656101
9KV6 (No Gprot) APeptideComplement PeptideC3aBMus musculusTLQP21-2.882025-11-2610.1101/2025.05.26.656101
9KV8APeptideComplement PeptideC3aBMus musculusTLQP21-Go/β1/γ23.172025-11-2610.1101/2025.05.26.656101
9KV8 (No Gprot) APeptideComplement PeptideC3aBMus musculusTLQP21-3.172025-11-2610.1101/2025.05.26.656101




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Download 9KZ8_nogp.zip



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