Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 8.3710
2R:R:K16 5.5625404
3R:R:L30 3.7875415
4R:R:F38 6.915407
5R:R:I64 2.16407
6R:R:F65 4.275407
7R:R:N68 9.065439
8R:R:L69 3.56409
9R:R:D73 7.245409
10R:R:F74 4.4975407
11R:R:L83 5.564516
12R:R:Y87 5.846516
13R:R:W93 9.008559
14R:R:M103 4.57405
15R:R:R111 6.0725418
16R:R:F117 7.814538
17R:R:Y126 6.602567
18R:R:H134 3.455404
19R:R:W152 4.338539
20R:R:N171 4.7125421
21R:R:F180 7.452513
22R:R:F197 5418
23R:R:L201 2.405407
24R:R:I212 5.655405
25R:R:F244 5.74518
26R:R:R251 8.656515
27R:R:F276 6.44514
28R:R:L280 3.9225415
29R:R:T283 4.4525418
30R:R:Y284 4.886517
31R:R:D290 4.8325409
32R:R:Y294 5.365609
33R:R:Y295 5.642547
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y87 37.12393.26YesYes106
2R:R:I26 R:R:Y87 50.9173.63NoYes156
3R:R:I26 R:R:L274 50.50832.85NoNo051
4R:R:D23 R:R:L274 49.07794.07NoNo041
5R:R:D23 R:R:R270 15.335911.91NoNo041
6R:R:D23 R:R:F25 34.19673.58NoNo046
7R:R:F25 R:R:K28 32.65393.72NoNo063
8R:R:D24 R:R:K28 31.10094.15NoNo043
9R:R:D24 R:R:R90 27.96424.76NoNo044
10R:R:R22 R:R:R90 26.38066.4NoNo034
11R:R:N171 R:R:R22 21.5532.41YesNo013
12R:R:E12 R:R:N171 15.15717.89NoYes251
13R:R:D14 R:R:E12 13.61436.5NoNo055
14R:R:D14 R:R:K15 10.23241.38NoNo053
15L:L:?1 R:R:L83 40.60797.7YesYes106
16R:R:L34 R:R:L83 82.02814.15NoYes086
17R:R:L34 R:R:L80 81.39468.3NoNo088
18R:R:F38 R:R:L80 80.77147.31YesNo078
19R:R:F38 R:R:I77 78.31935.02YesNo076
20L:L:?1 R:R:R111 44.20947.88YesYes108
21R:R:R111 R:R:T283 73.57856.47YesYes188
22R:R:F244 R:R:T283 1005.19YesYes188
23R:R:F244 R:R:N286 12.51098.46YesNo089
24R:R:C243 R:R:N286 10.75359.45NoNo089
25R:R:I77 R:R:L42 77.0834.28NoNo067
26R:R:F74 R:R:L42 76.48534.87YesNo077
27R:R:F74 R:R:N45 74.81484.83YesNo079
28R:R:N45 R:R:P291 41.37934.89NoNo099
29R:R:F296 R:R:P291 22.39591.44NoNo089
30R:R:D73 R:R:N45 33.323116.16YesNo099
31L:L:?1 R:R:F180 39.463615.81YesYes103
32R:R:F180 R:R:H189 44.19416.79YesNo035
33R:R:H161 R:R:H189 42.70243.58NoNo075
34R:R:H161 R:R:W188 41.43044.23NoNo075
35R:R:L158 R:R:W188 38.99875.69NoNo055
36R:R:I154 R:R:L158 38.14054.28NoNo055
37R:R:I154 R:R:T155 37.51211.52NoNo057
38R:R:I116 R:R:T155 36.36781.52NoNo057
39R:R:I116 R:R:L151 35.81615.71NoNo057
40R:R:F117 R:R:L151 35.27469.74YesNo087
41R:R:F296 R:R:I51 15.60661.26NoNo087
42R:R:L69 R:R:Y295 12.71523.52YesYes097
43R:R:D290 R:R:D73 22.50833.99YesYes099
44R:R:D290 R:R:L69 20.65394.07YesYes099
45R:R:D290 R:R:P291 26.01283.22YesNo099
46R:R:D290 R:R:Y294 29.32828.05YesYes099
47R:R:F117 R:R:L69 25.57343.65YesYes089
48R:R:F117 R:R:S148 28.86853.96YesNo388
49R:R:F65 R:R:S148 28.10732.64YesNo078
50R:R:A144 R:R:F65 22.67692.77NoYes077
51R:R:A144 R:R:S61 11.51983.42NoNo076
52R:R:F244 R:R:I115 67.19287.54YesNo088
53R:R:I115 R:R:P200 65.79313.39NoNo089
54R:R:P200 R:R:T119 62.9633.5NoNo097
55R:R:I203 R:R:T119 61.53264.56NoNo077
56R:R:C207 R:R:I203 60.0921.64NoNo087
57R:R:C207 R:R:Y126 58.64115.38NoYes087
58R:R:V130 R:R:Y126 24.245213.88NoYes087
59R:R:H131 R:R:V130 20.99628.3NoNo078
60R:R:F127 R:R:H131 15.84673.39NoNo057
61R:R:F127 R:R:H134 12.36273.39NoYes054
62R:R:L76 R:R:N110 27.51986.87NoNo079
63R:R:L75 R:R:N110 25.282210.98NoNo069
64R:R:L76 R:R:Y284 21.29764.69NoYes077
65R:R:L83 R:R:M103 41.83914.24YesYes065
66R:R:M103 R:R:W93 38.48795.82YesYes059
67R:R:F95 R:R:W93 17.445711.02NoYes079
68R:R:C100 R:R:W93 17.37429.14NoYes599
69R:R:C100 R:R:M167 14.98853.24NoNo093
70R:R:M167 R:R:P168 10.04345.03NoNo034
71R:R:L75 R:R:M106 23.03452.83NoNo065
72R:R:F105 R:R:M106 20.77653.73NoNo065
73R:R:F105 R:R:T159 13.94136.49NoNo067
74R:R:I211 R:R:Y126 27.73442.42NoYes087
75R:R:F180 R:R:F276 11.23884.29YesYes134
76R:R:F276 R:R:F277 10.48797.5YesNo045
77R:R:F180 R:R:R251 16.86334.28YesYes135
78R:R:F197 R:R:F244 13.84934.29YesYes188
79R:R:F240 R:R:F244 17.31293.22NoYes198
80R:R:F240 R:R:L201 15.99493.65NoYes097
81R:R:I211 R:R:I233 24.38834.42NoNo087
82R:R:I212 R:R:I233 21.13412.94YesNo057
83R:R:I212 R:R:I230 12.510910.3YesNo056
84R:R:I226 R:R:I230 10.75352.94NoNo066
85R:R:V293 R:R:Y294 10.50833.79NoYes089
86R:R:F180 R:R:L280 23.24396.09YesYes135
87R:R:I254 R:R:R251 16.73053.76NoYes045
88R:R:I254 R:R:V272 14.91193.07NoNo044
89R:R:L257 R:R:V272 11.24391.49NoNo034
90R:R:L83 R:R:Y284 38.25293.52YesYes167
91R:R:R111 R:R:Y284 32.81234.12YesYes187
92R:R:L83 R:R:Y87 23.22868.21YesYes166
93R:R:L280 R:R:T283 28.71522.95YesYes158
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:L83 7.7 1 Yes Yes 0 6 0 1
L:L:?1 R:R:Y87 3.26 1 Yes Yes 0 6 0 1
L:L:?1 R:R:L107 10.27 1 Yes No 0 6 0 1
L:L:?1 R:R:R111 7.88 1 Yes Yes 0 8 0 1
L:L:?1 R:R:S178 5.57 1 Yes No 0 4 0 1
L:L:?1 R:R:F180 15.81 1 Yes Yes 0 3 0 1
L:L:?1 R:R:Y284 7.61 1 Yes Yes 0 7 0 1
R:R:I26 R:R:L30 7.14 1 No Yes 5 5 2 2
R:R:I26 R:R:Y87 3.63 1 No Yes 5 6 2 1
R:R:L30 R:R:Y87 3.52 1 Yes Yes 5 6 2 1
R:R:L34 R:R:L83 4.15 0 No Yes 8 6 2 1
R:R:E37 R:R:Y284 4.49 1 No Yes 7 7 2 1
R:R:L107 R:R:L76 5.54 0 No No 6 7 1 2
R:R:L76 R:R:Y284 4.69 0 No Yes 7 7 2 1
R:R:C79 R:R:M103 3.24 0 No Yes 6 5 2 2
R:R:C79 R:R:L107 7.94 0 No No 6 6 2 1
R:R:L83 R:R:Y87 8.21 1 Yes Yes 6 6 1 1
R:R:L83 R:R:M103 4.24 1 Yes Yes 6 5 1 2
R:R:L83 R:R:Y284 3.52 1 Yes Yes 6 7 1 1
R:R:W91 R:R:Y87 10.61 0 No Yes 4 6 2 1
R:R:E196 R:R:R111 5.82 0 No Yes 5 8 2 1
R:R:R111 R:R:T283 6.47 1 Yes Yes 8 8 1 2
R:R:R111 R:R:Y284 4.12 1 Yes Yes 8 7 1 1
R:R:F180 R:R:H189 6.79 1 Yes No 3 5 1 2
R:R:F180 R:R:R251 4.28 1 Yes Yes 3 5 1 2
R:R:F180 R:R:F276 4.29 1 Yes Yes 3 4 1 2
R:R:F180 R:R:L280 6.09 1 Yes Yes 3 5 1 2
R:R:F276 R:R:R251 12.83 1 Yes Yes 4 5 2 2
R:R:F276 R:R:L280 3.65 1 Yes Yes 4 5 2 2
R:R:L280 R:R:T283 2.95 1 Yes Yes 5 8 2 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8JIL_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.85
Number of Linked Nodes 270
Number of Links 298
Number of Hubs 33
Number of Links mediated by Hubs 120
Number of Communities 7
Number of Nodes involved in Communities 41
Number of Links involved in Communities 53
Path Summary
Number Of Nodes in MetaPath 94
Number Of Links MetaPath 93
Number of Shortest Paths 51056
Length Of Smallest Path 3
Average Path Length 15.487
Length of Longest Path 36
Minimum Path Strength 1.215
Average Path Strength 5.30846
Maximum Path Strength 13.4467
Minimum Path Correlation 0.7
Average Path Correlation 0.92782
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.22581
Average % Of Corr. Nodes 46.5721
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 37.1051
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development
Gene OntologyBiological Process• multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • synapse   • cell junction   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • cell population proliferation   • cellular process   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • D2 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • response to peptide hormone   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • cellular response to forskolin   • response to forskolin   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • nucleoplasm   • Golgi apparatus   • endomembrane system   • ciliary basal body   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • nicotinic acid receptor activity   • myeloid cell apoptotic process   • multicellular organismal process   • homeostatic process   • leukocyte apoptotic process   • cell death   • neutrophil homeostasis   • neutrophil apoptotic process   • multicellular organismal-level homeostasis   • leukocyte homeostasis   • inflammatory cell apoptotic process   • homeostasis of number of cells   • apoptotic process   • myeloid cell homeostasis   • programmed cell death   • positive regulation of cell communication   • establishment of protein localization   • system process   • nitrogen compound transport   • regulation of adiponectin secretion   • positive regulation of establishment of protein localization   • positive regulation of adiponectin secretion   • adiponectin secretion   • regulation of biological quality   • regulation of hormone levels   • establishment of protein localization to extracellular region   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • endocrine hormone secretion   • positive regulation of multicellular organismal process   • regulation of hormone secretion   • transport   • positive regulation of secretion by cell   • hormone secretion   • protein localization to extracellular region   • positive regulation of protein transport   • secretion by cell   • regulation of secretion by cell   • positive regulation of hormone secretion   • positive regulation of secretion   • signal release   • regulation of multicellular organismal process   • regulation of signaling   • secretion   • regulation of transport   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • regulation of protein transport   • positive regulation of protein secretion   • endocrine process   • positive regulation of transport   • protein transport   • hormone transport   • regulation of cell communication   • positive regulation of signaling   • regulation of programmed cell death   • regulation of neutrophil apoptotic process   • positive regulation of myeloid cell apoptotic process   • positive regulation of neutrophil apoptotic process   • regulation of immune system process   • positive regulation of leukocyte apoptotic process   • positive regulation of immune system process   • regulation of leukocyte apoptotic process   • positive regulation of programmed cell death   • regulation of apoptotic process   • positive regulation of apoptotic process   • regulation of myeloid cell apoptotic process   • negative regulation of catabolic process   • lipid catabolic process   • catabolic process   • negative regulation of metabolic process   • negative regulation of biological process   • regulation of catabolic process   • regulation of lipid catabolic process   • negative regulation of cellular process   • negative regulation of lipid metabolic process   • negative regulation of lipid catabolic process
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNIO
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeNIO
NameNiacin
Synonyms3-carboxypyridine
Identifier
FormulaC6 H5 N O2
Molecular Weight123.109
SMILES
PubChem938
Formal Charge0
Total Atoms14
Total Chiral Atoms0
Total Bonds14
Total Aromatic Bonds6

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ8TDS4
Sequence
>8JIL_nogp_Chain_R
FLEIDKKNC CVFRDDFIV KVLPPVLGL EFIFGLLGN GLALWIFCF 
HLKSWKSSR IFLFNLAVA DFLLIICLP FLMDNYVRR WDWKFGDIP 
CRLMLFMLA MNRQGSIIF LTVVAVDRY FRVVHPHHA LNKISNRTA 
AIISCLLWG ITIGLTVHL LKKKMPIQN GGANLCSSF SICHTFQWH 
EAMFLLEFF LPLGIILFC SARIIWSLR QRQMDRHAK IKRAITFIM 
VVAIVFVIC FLPSVVVRI RIFWLLHTS GTQNCEVYR SVDLAFFIT 
LSFTYMNSM LDPVVYYFS


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8J6LAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacin-Gi1/β1/γ23.052024-04-0310.1016/j.celrep.2023.113406
8J6L (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacin-3.052024-04-0310.1016/j.celrep.2023.113406
8J6IAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-Gi1/β1/γ22.922024-04-0310.1016/j.celrep.2023.113406
8J6I (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-2.922024-04-0310.1016/j.celrep.2023.113406
8JHNAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMMF-Go/β1/γ23.752024-03-0610.1038/s41467-024-46239-2
8JHN (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMMF-3.752024-03-0610.1038/s41467-024-46239-2
8JERAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensAcipimox-Go/β1/γ23.452024-03-0610.1038/s41467-024-46239-2
8JER (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensAcipimox-3.452024-03-0610.1038/s41467-024-46239-2
8IYWAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensGSK256073-Go/β1/γ23.452024-03-0610.1038/s41467-024-46239-2
8IYW (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensGSK256073-3.452024-03-0610.1038/s41467-024-46239-2
8IYHAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-Go/β1/γ23.32024-03-0610.1038/s41467-024-46239-2
8IYH (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-3.32024-03-0610.1038/s41467-024-46239-2
8IY9AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacin-Go/β1/γ23.372024-03-0610.1038/s41467-024-46239-2
8IY9 (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacin-3.372024-03-0610.1038/s41467-024-46239-2
8I7WAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensGSK256073-Gi1/β1/γ23.392024-02-0710.1038/s41467-023-42764-8
8I7W (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensGSK256073-3.392024-02-0710.1038/s41467-023-42764-8
8I7VAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensAcipimox-Gi1/β1/γ22.772024-02-0710.1038/s41467-023-42764-8
8I7V (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensAcipimox-2.772024-02-0710.1038/s41467-023-42764-8
8J6JAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensGSK256073-Gi1/β1/γ22.82024-01-1010.1016/j.celrep.2023.113406
8J6J (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensGSK256073-2.82024-01-1010.1016/j.celrep.2023.113406
8IJDAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-Gi1/β1/γ23.252024-01-0310.1038/s41421-023-00610-7
8IJD (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-3.252024-01-0310.1038/s41421-023-00610-7
8IJBAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensAcipimox-Gi1/β1/γ23.232024-01-0310.1038/s41421-023-00610-7
8IJB (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensAcipimox-3.232024-01-0310.1038/s41421-023-00610-7
8IJAAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacin-Gi1/β1/γ22.692024-01-0310.1038/s41421-023-00610-7
8IJA (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacin-2.692024-01-0310.1038/s41421-023-00610-7
8IJ3AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiens--Gi1/β1/γ23.282024-01-0310.1038/s41421-023-00610-7
8IJ3 (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiens--3.282024-01-0310.1038/s41421-023-00610-7
8J6RAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-Gi1/β1/γ22.762023-12-0610.1038/s41467-023-43537-z
8J6R (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-2.762023-12-0610.1038/s41467-023-43537-z
8J6QAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensβ-HydroxybutyrateCompound 9nGi1/β1/γ22.62023-12-0610.1038/s41467-023-43537-z
8J6Q (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensβ-HydroxybutyrateCompound 9n2.62023-12-0610.1038/s41467-023-43537-z
8J6PAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacinCompound 9nGi1/β1/γ22.552023-12-0610.1038/s41467-023-43537-z
8J6P (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacinCompound 9n2.552023-12-0610.1038/s41467-023-43537-z
8K5DAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensGSK256073--3.742023-11-2210.1038/s41467-023-42764-8
8K5CAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensAcipimox--3.132023-11-2210.1038/s41467-023-42764-8
8K5BAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacin--3.432023-11-2210.1038/s41467-023-42764-8
8H2GAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacin-Gi1/β1/γ23.012023-10-11To be published
8H2G (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacin-3.012023-10-11To be published
8JZ7AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-Gi1/β1/γ22.62023-10-0410.1038/s41392-023-01625-y
8JZ7 (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-2.62023-10-0410.1038/s41392-023-01625-y
8IHBAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensGSK256073-Gi1/β1/γ22.852023-09-1310.1038/s41467-023-41650-7
8IHB (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensGSK256073-2.852023-09-1310.1038/s41467-023-41650-7
8JIMAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMMF-Gi1/β1/γ22.982023-09-0610.1016/j.molcel.2023.07.030
8JIM (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMMF-2.982023-09-0610.1016/j.molcel.2023.07.030
8JILAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacin-Gi1/β1/γ23.52023-09-0610.1016/j.molcel.2023.07.030
8JIL (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacin-3.52023-09-0610.1016/j.molcel.2023.07.030
8JIIAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacinCompound 9nGi1/β1/γ23.172023-09-0610.1016/j.molcel.2023.07.030
8JII (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensNiacinCompound 9n3.172023-09-0610.1016/j.molcel.2023.07.030
8JHYAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiens-Compound 9nGi1/β1/γ22.872023-09-0610.1016/j.molcel.2023.07.030
8JHY (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiens-Compound 9n2.872023-09-0610.1016/j.molcel.2023.07.030
8IHIAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensAcifran-Gi1/β1/γ23.112023-08-3010.1038/s41467-023-41650-7
8IHI (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensAcifran-3.112023-08-3010.1038/s41467-023-41650-7
8IHHAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensLUF6283-Gi1/β1/γ23.062023-08-3010.1038/s41467-023-41650-7
8IHH (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensLUF6283-3.062023-08-3010.1038/s41467-023-41650-7
8IHFAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-Gi1/β1/γ22.972023-08-3010.1038/s41467-023-41650-7
8IHF (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-2.972023-08-3010.1038/s41467-023-41650-7
7ZLYAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiens---2.72023-04-1210.1038/s41467-023-37177-6
7ZL9AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiens---2.72023-04-1210.1038/s41467-023-37177-6
7XK2AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-Gi1/β1/γ23.12023-02-2210.1038/s41467-023-37177-6
7XK2 (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK6892-3.12023-02-2210.1038/s41467-023-37177-6
8UUJAAlicarboxylic acidHydroxycarboxylic AcidHCA2Mus musculusFCH-2296413-Gi1/β1/γ22.622025-02-2610.1016/j.cell.2024.11.001
8UUJ (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Mus musculusFCH-2296413-2.622025-02-2610.1016/j.cell.2024.11.001
8UTDAAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK1903-Gi1/β1/γ23.242025-02-2610.1016/j.cell.2024.11.001
8UTD (No Gprot) AAlicarboxylic acidHydroxycarboxylic AcidHCA2Homo sapiensMK1903-3.242025-02-2610.1016/j.cell.2024.11.001
9IQTAAlicarboxylic acidHydroxycarboxylic acidHCA2Homo sapiensNiacin-Gi1/β1/γ22.92024-10-02doi.org/10.1016/j.jmb.2024.168795
9IQT (No Gprot) AAlicarboxylic acidHydroxycarboxylic acidHCA2Homo sapiensNiacin-2.92024-10-02doi.org/10.1016/j.jmb.2024.168795




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8JIL_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.