Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:D16 5.8325415
2R:R:F19 4.2405
3R:R:P20 4.206515
4R:R:Y24 4.61833619
5R:R:N35 5.115409
6R:R:Y55 3.76507
7R:R:M57 2.87405
8R:R:Y66 6.325407
9R:R:W73 7.3825417
10R:R:Y76 7.716516
11R:R:F77 5.53515
12R:R:D81 6.0525414
13R:R:W83 5.13625819
14R:R:H85 5.09517
15R:R:F107 7.655438
16R:R:Y116 4.1175428
17R:R:H121 3.8526
18R:R:F125 4.2525426
19R:R:F167 6.2375414
20R:R:F169 8.848504
21R:R:E170 5.5925414
22R:R:F172 4.864515
23R:R:M174 5.165411
24R:R:N182 6.73415
25R:R:Y201 5.88408
26R:R:L229 4.425408
27R:R:F237 5.812508
28R:R:Y240 5.466516
29R:R:L244 6.5225415
30R:R:Y251 4.245403
31R:R:F265 8.382514
32R:R:H269 7.164515
33R:R:V280 2.45408
34R:R:D282 5.04449
35R:R:C287 2.15407
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F172 R:R:F265 11.83687.5YesYes154
2R:R:E170 R:R:F172 17.25644.66YesYes145
3R:R:D16 R:R:H269 14.05196.3YesYes155
4R:R:F265 R:R:H269 14.357312.44YesYes145
5R:R:F265 R:R:S13 13.20495.28YesNo045
6R:R:D16 R:R:S13 10.322111.78YesNo055
7R:R:S13 R:R:S266 16.12044.89NoNo052
8R:R:R14 R:R:S266 10.75377.91NoNo022
9R:R:D16 R:R:H17 10.25691.26YesNo055
10R:R:E170 R:R:Y76 18.24594.49YesYes146
11R:R:F77 R:R:H269 31.41013.39YesYes155
12R:R:F77 R:R:Y24 25.10696.19YesYes159
13R:R:S276 R:R:Y24 13.07065.09NoYes079
14R:R:S276 R:R:V27 11.34416.46NoNo077
15R:R:L70 R:R:Y24 28.62495.86NoYes089
16R:R:W73 R:R:Y76 18.49028.68YesYes176
17R:R:F97 R:R:W73 47.359415.03NoYes077
18R:R:F97 R:R:Y66 47.6738.25NoYes077
19R:R:C279 R:R:Y66 76.83945.38NoYes097
20R:R:C279 R:R:I67 14.52016.55NoNo096
21R:R:C279 R:R:D63 66.90016.22NoNo099
22R:R:D63 R:R:N35 29.99316.73NoYes099
23R:R:N35 R:R:P283 34.28078.15YesNo099
24R:R:R247 R:R:Y268 33.33612.35NoNo145
25R:R:Y240 R:R:Y268 20.95367.94YesNo165
26R:R:T275 R:R:Y240 39.0573.75NoYes086
27R:R:F237 R:R:T275 39.24433.89YesNo088
28R:R:F237 R:R:N278 50.74727.25YesNo089
29R:R:D282 R:R:N278 52.40859.42YesNo099
30R:R:D282 R:R:D63 75.12115.32YesNo099
31R:R:I67 R:R:N35 13.3232.83NoYes069
32R:R:A38 R:R:P283 30.99881.87NoNo099
33R:R:A38 R:R:S60 15.82721.71NoNo098
34R:R:L39 R:R:S60 14.10074.5NoNo078
35R:R:L39 R:R:M57 12.36612.83NoYes075
36R:R:D282 R:R:L108 1002.71YesNo498
37R:R:L108 R:R:Y286 99.98784.69NoNo089
38R:R:L229 R:R:Y286 99.44625.86YesNo089
39R:R:L229 R:R:Y201 95.71244.69YesYes088
40R:R:R115 R:R:Y201 79.34367.2NoYes098
41R:R:I111 R:R:R115 66.31783.76NoNo099
42R:R:I111 R:R:L52 12.21142.85NoNo098
43R:R:I111 R:R:Y55 55.38913.63NoYes097
44R:R:S138 R:R:Y55 41.11322.54NoYes077
45R:R:F107 R:R:S138 21.24683.96YesNo387
46R:R:N58 R:R:S138 18.74677.45NoNo397
47R:R:N58 R:R:W142 17.55365.65NoNo399
48R:R:F107 R:R:W142 17.66777.02YesNo389
49R:R:W83 R:R:Y76 11.14875.79YesYes196
50R:R:C168 R:R:W83 13.08287.84NoYes199
51R:R:I103 R:R:W142 32.76197.05NoNo079
52R:R:E145 R:R:I103 27.81064.1NoNo077
53R:R:E145 R:R:N149 25.32275.26NoNo077
54R:R:N149 R:R:T99 22.82675.85NoNo075
55R:R:F95 R:R:T99 20.32257.78NoNo065
56R:R:F95 R:R:L153 10.224413.4NoNo064
57R:R:C168 R:R:F169 12.06892.79NoYes094
58R:R:F190 R:R:F237 14.43875.36NoYes088
59R:R:F190 R:R:H241 12.55759.05NoNo088
60R:R:H241 R:R:Y102 11.91823.27NoNo087
61R:R:F237 R:R:I105 10.58276.28YesNo088
62R:R:S112 R:R:Y201 29.30097.63NoYes098
63R:R:S112 R:R:S200 20.8076.52NoNo098
64R:R:S200 R:R:Y116 19.56112.54NoYes088
65R:R:H121 R:R:Y116 10.64784.36YesYes268
66R:R:I204 R:R:R115 19.41851.25NoNo089
67R:R:I204 R:R:V119 18.18484.61NoNo088
68R:R:L244 R:R:Y268 12.64713.52YesNo155
69R:R:L244 R:R:N182 25.583313.73YesYes155
70R:R:M174 R:R:N182 14.89072.8YesYes115
71R:R:M174 R:R:Y251 13.92167.18YesYes013
72R:R:V119 R:R:V208 16.91841.6NoNo088
73R:R:K219 R:R:V208 10.59491.52NoNo068
74R:R:S271 R:R:Y240 13.93385.09NoYes076
75R:R:A38 R:R:C287 14.10071.81NoYes097
76R:R:D81 R:R:Y76 12.594210.34YesYes146
77R:R:F172 R:R:R247 28.44583.21YesNo154
78R:R:L70 R:R:Y66 28.47845.86NoYes087
79R:R:F77 R:R:W73 14.52423.01YesYes157
80R:R:W73 R:R:W83 20.54642.81YesYes179
81R:R:L244 R:R:Y240 16.72715.86YesYes156
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 9BIP_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.71
Number of Linked Nodes 265
Number of Links 295
Number of Hubs 35
Number of Links mediated by Hubs 128
Number of Communities 4
Number of Nodes involved in Communities 40
Number of Links involved in Communities 58
Path Summary
Number Of Nodes in MetaPath 82
Number Of Links MetaPath 81
Number of Shortest Paths 54171
Length Of Smallest Path 3
Average Path Length 14.6142
Length of Longest Path 32
Minimum Path Strength 1.355
Average Path Strength 5.43543
Maximum Path Strength 15.85
Minimum Path Correlation 0.7
Average Path Correlation 0.932686
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4
Average % Of Corr. Nodes 47.7046
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 38.0902
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• protein-containing complex binding   • binding   • G-protein beta/gamma-subunit complex binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • metal ion binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • cell communication   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cellular anatomical structure   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyBiological Process
Gene OntologyCellular Component• protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cellular anatomical structure   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • cell adhesion   • regulation of cell adhesion   • regulation of defense response   • regulation of response to external stimulus   • defense response   • positive regulation of biological process   • response to external stimulus   • regulation of inflammatory response   • positive regulation of response to stimulus   • positive regulation of response to external stimulus   • positive regulation of inflammatory response   • regulation of response to stimulus   • regulation of response to stress   • response to stress   • positive regulation of defense response   • inflammatory response   • positive regulation of cell communication   • positive regulation of signal transduction   • regulation of small GTPase mediated signal transduction   • regulation of signal transduction   • Rho protein signal transduction   • regulation of intracellular signal transduction   • positive regulation of cellular process   • regulation of signaling   • positive regulation of intracellular signal transduction   • regulation of Rho protein signal transduction   • positive regulation of Rho protein signal transduction   • regulation of cell communication   • positive regulation of small GTPase mediated signal transduction   • positive regulation of signaling   • regulation of vascular permeability   • circulatory system process   • vascular process in circulatory system   • regulation of biological quality   • blood circulation   • cellular developmental process   • connective tissue development   • mesangial cell development   • cell development   • epithelial cell differentiation   • renal system development   • kidney vasculature development   • pericyte cell differentiation   • renal system vasculature development   • mesangial cell differentiation   • cell differentiation   • nephron development   • epithelial cell differentiation involved in kidney development   • blood vessel development   • epithelium development   • tissue development   • glomerular mesangium development   • glomerular mesangial cell development   • vasculature development   • glomerular mesangial cell differentiation   • circulatory system development   • glomerulus development   • epithelial cell development   • cell differentiation involved in kidney development   • glomerulus vasculature development   • kidney development   • regulation of developmental process   • negative regulation of biological process   • angiogenesis   • regulation of vasculature development   • tube morphogenesis   • regulation of multicellular organismal process   • regulation of anatomical structure morphogenesis   • regulation of multicellular organismal development   • blood vessel morphogenesis   • tube development   • negative regulation of blood vessel morphogenesis   • negative regulation of developmental process   • negative regulation of angiogenesis   • negative regulation of vasculature development   • anatomical structure morphogenesis   • regulation of angiogenesis   • anatomical structure formation involved in morphogenesis   • negative regulation of multicellular organismal process   • response to pH   • response to abiotic stimulus   • response to acidic pH   • wound healing   • angiogenesis involved in wound healing   • response to wounding
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP46093
Sequence
>9BIP_nogp_Chain_R
EGCHVDSRV DHLFPPSLY IFVIGVGLP TNCLALWAA YRQVQQRNE 
LGVYLMNLS IADLLYICT LPLWVDYFL HHDNWIHGP GSCKLFGFI 
FYTNIYISI AFLCCISVD RYLAVAHPL RFARLRRVK TAVAVSSVV 
WATELGANS APLFHDELF RDRYNHTFC FEKFPMEGW VAWMNLYRV 
FVGFLFPWA LMLLSYRGI LRAVRGSVS TERQEKAKI KRLALSLIA 
IVLVCFAPY HVLLLSRSA IYLGRPWDC GFEERVFSA YHSSLAFTS 
LNCVADPIL YCLVNEGAR SD


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8ZFEAOrphanOrphanGPR4Mus musculus---2.562025-02-2610.1016/j.cell.2024.12.001
8ZFDAOrphanOrphanGPR4Mus musculus---2.562025-02-2610.1016/j.cell.2024.12.001
8ZFBAOrphanOrphanGPR4Xenopus tropicalis---3.782025-02-2610.1016/j.cell.2024.12.001
8ZF7AOrphanOrphanGPR4Xenopus tropicalis---3.152025-02-2610.1016/j.cell.2024.12.001
9JVGAOrphanOrphanGPR4Mus musculus--chim(NtGi1-Gs)/β1/γ22.762025-02-2610.1016/j.cell.2024.12.001
9JVG (No Gprot) AOrphanOrphanGPR4Mus musculus--2.762025-02-2610.1016/j.cell.2024.12.001
8ZFCAOrphanOrphanGPR4Mus musculus--chim(NtGi1-Gs)/β1/γ22.682025-02-2610.1016/j.cell.2024.12.001
8ZFC (No Gprot) AOrphanOrphanGPR4Mus musculus--2.682025-02-2610.1016/j.cell.2024.12.001
8ZFAAOrphanOrphanGPR4Xenopus tropicalis--chim(NtGi1-Gs)/β1/γ22.962025-02-2610.1016/j.cell.2024.12.001
8ZFA (No Gprot) AOrphanOrphanGPR4Xenopus tropicalis--2.962025-02-2610.1016/j.cell.2024.12.001
8ZF9AOrphanOrphanGPR4Mus musculus--chim(NtGi1-Gs)/β1/γ22.562025-02-2610.1016/j.cell.2024.12.001
8ZF9 (No Gprot) AOrphanOrphanGPR4Mus musculus--2.562025-02-2610.1016/j.cell.2024.12.001
8ZF6AOrphanOrphanGPR4Xenopus tropicalis--chim(NtGi1-Gs)/β1/γ22.982025-02-2610.1016/j.cell.2024.12.001
8ZF6 (No Gprot) AOrphanOrphanGPR4Xenopus tropicalis--2.982025-02-2610.1016/j.cell.2024.12.001
8ZD1AOrphanOrphanGPR4Xenopus tropicalis--chim(NtGi1-Gs)/β1/γ22.62025-02-2610.1016/j.cell.2024.12.001
8ZD1 (No Gprot) AOrphanOrphanGPR4Xenopus tropicalis--2.62025-02-2610.1016/j.cell.2024.12.001
8ZF4AOrphanOrphanGPR4Xenopus tropicalis---3.052025-02-2610.1016/j.cell.2024.12.001
9J31AOrphanOrphanGPR4Danio rerio--chim(NtGi1-Gs)/β1/γ23.052025-01-22doi.org/10.1038/s41467-025-55901-2
9J31 (No Gprot) AOrphanOrphanGPR4Danio rerio--3.052025-01-22doi.org/10.1038/s41467-025-55901-2
8ZFZAOrphanOrphanGPR4Danio rerio--chim(NtGi1-Gs)/β1/γ23.32025-01-22doi.org/10.1038/s41467-025-55901-2
8ZFZ (No Gprot) AOrphanOrphanGPR4Danio rerio--3.32025-01-22doi.org/10.1038/s41467-025-55901-2
9BIPAOrphanOrphanGPR4Homo sapiens--Gs/β1/γ22.82025-01-22doi.org/10.1016/j.cell.2024.11.036
9BIP (No Gprot) AOrphanOrphanGPR4Homo sapiens--2.82025-01-22doi.org/10.1016/j.cell.2024.11.036
8ZFJAOrphanOrphanGPR4Danio rerio--chim(NtGi1-Gs)/β1/γ23.12024-08-07To be published
8ZFJ (No Gprot) AOrphanOrphanGPR4Danio rerio--3.12024-08-07To be published
9JVMAOrphanOrphanGPR4Xenopus tropicalis---2.362025-02-2610.1016/j.cell.2024.12.001
9JVHAOrphanOrphanGPR4Mus musculus---2.762025-02-2610.1016/j.cell.2024.12.001




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